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OR234009.1__WNV46904.1__LPLmcIH18_0053__00053
Bact-VirOR234009.1__WNV46904.1__LPLmcIH18_0053__00053
Identity
- Accession:
- OR234009 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-84
D2
high
residues 88-149
Domain cluster:
rep: MK448684.1__QBX14725.1__Javan151_0034__00017__D59-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07852.17 best | DUF1642 | 52.5 | 1.00e-13 | 100.0% | 45.6% |
D3
high
residues 153-213
Domain cluster:
rep: NC_071083.1__YP_010683437.1__PQF09_gp43__00043__D112-175
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07852.17 best | DUF1642 | 33.3 | 9.00e-08 | 93.4% | 17.4% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.75 | 47.0 | 5.56e-01 | 72.1% | 95.1% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 40.0 | 3.48e-01 | 90.2% | 93.6% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.36e-01 | 78.7% | 92.2% |
| 5yrzA01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 40.0 | 3.49e-01 | 91.8% | 82.9% |
| 4gr5C01 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.51 | 35.0 | 3.46e-01 | 70.5% | 68.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025385 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.52 | 41.0 | 2.98e-01 | 86.9% | 65.6% |
| 3650414 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.50 | 31.0 | 3.33e-01 | 98.4% | 76.0% |