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OR234010.1__WNV46956.1__LPLmcIH19_0039__00039
Bact-VirOR234010.1__WNV46956.1__LPLmcIH19_0039__00039
Identity
- Accession:
- OR234010 ↗
- Kingdom:
- phage
Quality
75.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-62
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4y97D00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.62 | 52.0 | 3.71e-01 | 100.0% | 32.0% |
| 3unvA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.61 | 48.0 | 2.98e-01 | 87.0% | 22.2% |
| 8a6tB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 46.0 | 3.64e-01 | 98.1% | 96.4% |
| 3ptaA04 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 41.0 | 3.01e-01 | 87.0% | 59.7% |
| 2c1lA02 | 2.40.330.30 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › | 0.54 | 38.0 | 2.80e-01 | 77.8% | 40.6% |
| 3laaA00 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.53 | 44.0 | 3.10e-01 | 92.6% | 37.9% |
| 4r8tB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 37.0 | 3.42e-01 | 77.8% | 91.8% |
| 1t7pA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.51 | 46.0 | 3.28e-01 | 100.0% | 47.1% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.50 | 42.0 | 2.78e-01 | 96.3% | 39.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3362800 | 375.1.1.193 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_FGT1_1 | 0.78 | 50.0 | 5.38e-01 | 72.2% | 77.8% |
| 5029199 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.72 | 51.0 | 4.51e-01 | 75.9% | 97.5% |
| 4886011 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.66 | 45.0 | 4.38e-01 | 79.6% | 63.3% |
| 5020293 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.66 | 39.0 | 4.24e-01 | 72.2% | 71.1% |
| 5062973 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 49.0 | 3.80e-01 | 96.3% | 35.4% |
| 5008323 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.62 | 53.0 | 3.99e-01 | 94.4% | 88.4% |
| 5036890 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 52.0 | 3.96e-01 | 94.4% | 92.8% |
| 4940391 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 3.93e-01 | 94.4% | 94.4% |
| 4980462 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 50.0 | 3.83e-01 | 92.6% | 92.0% |
| 4070233 | 375.1.1.6 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L40e | 0.61 | 39.0 | 4.11e-01 | 79.6% | 72.0% |
| 5012781 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.60 | 53.0 | 3.98e-01 | 98.1% | 92.3% |
| 5067766 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 53.0 | 4.01e-01 | 100.0% | 93.0% |
| 4967975 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 52.0 | 3.91e-01 | 98.1% | 90.0% |
| 4990538 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 50.0 | 3.84e-01 | 94.4% | 90.2% |
| 4978231 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 52.0 | 3.98e-01 | 100.0% | 92.8% |
| 4933539 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.54 | 46.0 | 3.03e-01 | 92.6% | 62.8% |
| 4155736 | 375.1.1.6 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L40e | 0.52 | 40.0 | 3.96e-01 | 100.0% | 86.4% |