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OR234010.1__WNV46962.1__LPLmcIH19_0045__00045
Bact-VirOR234010.1__WNV46962.1__LPLmcIH19_0045__00045
Identity
- Accession:
- OR234010 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-63
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.84 | 54.0 | 6.11e-01 | 70.5% | 85.1% |
| 4b3fX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 52.0 | 3.21e-01 | 73.8% | 13.2% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.76 | 51.0 | 5.06e-01 | 70.5% | 69.2% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 51.0 | 4.99e-01 | 72.1% | 78.5% |
| 1qguB04 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.73 | 47.0 | 4.29e-01 | 70.5% | 49.4% |
| 1t3uA01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.72 | 46.0 | 5.40e-01 | 95.1% | 93.0% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 49.0 | 4.62e-01 | 75.4% | 63.5% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.69 | 48.0 | 4.85e-01 | 73.8% | 75.4% |
| 2l37A00 | 6.10.250.890 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 43.0 | 4.98e-01 | 75.4% | 93.0% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.66 | 45.0 | 2.90e-01 | 70.5% | 17.1% |
| 2gtvX00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.65 | 47.0 | 3.91e-01 | 77.0% | 48.1% |
| 1dp3A00 | 1.10.10.450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TraM protein, DNA-binding | 0.64 | 31.0 | 3.26e-01 | 88.5% | 49.1% |
| 2v4jA01 | 6.10.140.1420 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 46.0 | 4.60e-01 | 86.9% | 96.8% |
| 4ottA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.57 | 51.0 | 4.03e-01 | 100.0% | 90.9% |
| 1k07A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 47.0 | 3.18e-01 | 100.0% | 94.7% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.55 | 40.0 | 3.55e-01 | 93.4% | 53.9% |
| 5d18A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 46.0 | 3.31e-01 | 98.4% | 68.3% |
| 1eljA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 42.0 | 3.07e-01 | 90.2% | 76.8% |
| 5zjgA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.52 | 46.0 | 3.79e-01 | 100.0% | 64.3% |
| 2oh1C00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 40.0 | 2.98e-01 | 86.9% | 58.1% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4553862 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.85 | 55.0 | 6.32e-01 | 70.5% | 88.9% |
| 3277087 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.82 | 56.0 | 4.81e-01 | 72.1% | 48.4% |
| 4432304 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.81 | 57.0 | 6.15e-01 | 75.4% | 90.0% |
| 3592841 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.80 | 63.0 | 6.05e-01 | 85.2% | 100.0% |
| 3800609 | 109.4.1.235 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 | 0.79 | 55.0 | 3.65e-01 | 73.8% | 18.8% |
| 4076265 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.79 | 55.0 | 6.01e-01 | 75.4% | 90.0% |
| 5079848 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.78 | 54.0 | 5.48e-01 | 73.8% | 73.3% |
| 4825592 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.78 | 69.0 | 4.99e-01 | 100.0% | 44.2% |
| 4954813 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.76 | 53.0 | 3.26e-01 | 73.8% | 99.7% |
| 3668758 | 3826.1.1.57 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › 2TM_P5A-ATPase | 0.76 | 54.0 | 5.47e-01 | 75.4% | 78.3% |
| 3808540 | 376.1.6.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › PF26200 | 0.75 | 51.0 | 3.78e-01 | 72.1% | 28.7% |
| 3607325 | 5071.1.1.0 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 0.75 | 53.0 | 5.73e-01 | 78.7% | 92.0% |
| 3802251 | 605.8.1.9 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › 2TM_P5A-ATPase | 0.74 | 52.0 | 5.32e-01 | 75.4% | 78.3% |
| 5053090 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.74 | 51.0 | 5.17e-01 | 72.1% | 98.3% |
| 5041347 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.74 | 52.0 | 3.55e-01 | 75.4% | 23.3% |
| 4001980 | 4099.1.1.21 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › RM3_Med14 | 0.73 | 62.0 | 5.04e-01 | 98.4% | 88.3% |
| 3973390 | 632.18.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 › DUF4398 | 0.73 | 60.0 | 5.75e-01 | 91.8% | 100.0% |
| 4055922 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.68 | 48.0 | 3.07e-01 | 73.8% | 15.9% |
| 4077505 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.67 | 56.0 | 3.75e-01 | 90.2% | 68.6% |
| 4608174 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.64 | 45.0 | 3.94e-01 | 73.8% | 75.6% |
| 3415735 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.60 | 41.0 | 3.61e-01 | 72.1% | 97.9% |
| 3261133 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.59 | 50.0 | 3.88e-01 | 96.7% | 57.9% |
| 3752445 | 102.1.1.143 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › XTBD | 0.56 | 42.0 | 4.06e-01 | 90.2% | 70.6% |
| 5080196 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.56 | 49.0 | 3.29e-01 | 95.1% | 49.5% |
| 5026869 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 40.0 | 3.71e-01 | 86.9% | 94.1% |
| 4484205 | 140.1.1.7 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 | 0.52 | 40.0 | 3.15e-01 | 90.2% | 77.4% |