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OR246918.1__WNA15519.1__X__00028
Bact-VirOR246918.1__WNA15519.1__X__00028
Identity
- Accession:
- OR246918 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-109
Domain cluster:
rep: MW462221.2__WKW83141.1__X__00042__D3-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16083.11 best | Phage_holin_3_3 | 29.0 | 1.30e-06 | 81.7% | 94.9% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7f16R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.72 | 55.0 | 4.04e-01 | 81.7% | 33.2% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.69 | 60.0 | 5.65e-01 | 93.3% | 79.0% |
| 7sf7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.69 | 53.0 | 3.88e-01 | 80.8% | 34.3% |
| 2o7gA00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 46.0 | 4.91e-01 | 88.5% | 85.2% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.65 | 36.0 | 3.74e-01 | 90.4% | 56.6% |
| 7eq1R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.64 | 48.0 | 3.56e-01 | 80.8% | 40.0% |
| 7p2yC03 | 1.20.150.20 | Mainly Alpha › Up-down Bundle › Lysin › ATP synthase alpha/beta chain, C-terminal domain | 0.64 | 43.0 | 4.10e-01 | 79.8% | 57.5% |
| 5zbqA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.63 | 49.0 | 3.53e-01 | 82.7% | 39.1% |
| 1tafB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.63 | 40.0 | 4.77e-01 | 75.0% | 95.7% |
| 1vzsA01 | 1.10.246.110 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Mitochondrial ATP synthase-coupling factor 6 | 0.61 | 35.0 | 4.24e-01 | 72.1% | 92.1% |
| 3rlfF04 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.61 | 46.0 | 3.51e-01 | 78.8% | 85.5% |
| 1tafA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.60 | 38.0 | 4.59e-01 | 70.2% | 98.5% |
| 1nktA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.60 | 49.0 | 4.13e-01 | 89.4% | 99.4% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.60 | 49.0 | 4.41e-01 | 90.4% | 80.4% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 44.0 | 4.44e-01 | 77.9% | 81.6% |
| 4ymuD00 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.58 | 48.0 | 3.78e-01 | 88.5% | 57.7% |
| 3n3wA00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.58 | 46.0 | 4.21e-01 | 87.5% | 80.6% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.57 | 47.0 | 4.21e-01 | 89.4% | 84.8% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.56 | 42.0 | 4.04e-01 | 99.0% | 68.3% |
| 3m9vA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.56 | 33.0 | 3.10e-01 | 76.0% | 47.2% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 42.0 | 3.14e-01 | 79.8% | 89.5% |
| 2eb1C00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.55 | 46.0 | 3.98e-01 | 92.3% | 82.8% |
| 1kqfC00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.55 | 43.0 | 3.39e-01 | 82.7% | 68.5% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.55 | 40.0 | 3.59e-01 | 75.0% | 64.6% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.54 | 39.0 | 3.66e-01 | 74.0% | 88.1% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 43.0 | 3.74e-01 | 87.5% | 57.2% |
| 1bh9B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.53 | 42.0 | 4.52e-01 | 86.5% | 100.0% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.52 | 38.0 | 2.62e-01 | 76.9% | 91.6% |
| 1n93X01 | 1.10.3040.10 | Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 1 › borna disease virus nucleoprotein, domain 1 | 0.50 | 39.0 | 3.14e-01 | 83.7% | 50.0% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 38.0 | 3.30e-01 | 81.7% | 74.9% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4242465 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.77 | 54.0 | 5.62e-01 | 71.2% | 84.2% |
| 3700820 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.72 | 54.0 | 5.73e-01 | 83.7% | 90.0% |
| 3410923 | 5001.1.1.3 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 | 0.72 | 56.0 | 3.95e-01 | 81.7% | 31.0% |
| 3882597 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.71 | 56.0 | 5.99e-01 | 93.3% | 96.7% |
| 3787527 | 142.3.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Sld7_C | 0.70 | 54.0 | 5.85e-01 | 81.7% | 100.0% |
| 3932773 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.70 | 53.0 | 4.23e-01 | 80.8% | 41.5% |
| 3968117 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.65 | 54.0 | 4.99e-01 | 93.3% | 70.4% |
| 4152306 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.64 | 47.0 | 3.57e-01 | 77.9% | 32.3% |
| 3588332 | 5069.1.1.23 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF2798 | 0.63 | 53.0 | 4.80e-01 | 92.3% | 75.0% |
| 3823868 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.61 | 51.0 | 4.48e-01 | 92.3% | 75.0% |
| None | — | 0.60 | 44.0 | 3.36e-01 | 76.9% | 31.9% | |
| 3958227 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.60 | 52.0 | 3.47e-01 | 94.2% | 25.1% |
| 3404400 | 129.1.1.36 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ABA_GPCR | 0.60 | 52.0 | 3.98e-01 | 93.3% | 76.1% |
| 3591589 | 5050.1.1.28 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › BT1 | 0.59 | 43.0 | 3.51e-01 | 76.9% | 87.5% |
| 4008972 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.58 | 43.0 | 4.14e-01 | 77.9% | 75.8% |
| 4537804 | 5076.2.1.7 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › UPF0259 | 0.58 | 49.0 | 3.91e-01 | 92.3% | 60.0% |
| 4883357 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.58 | 42.0 | 4.33e-01 | 76.0% | 90.9% |
| 3254232 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.57 | 45.0 | 3.93e-01 | 85.6% | 77.0% |
| 3752930 | 5001.1.1.3 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 | 0.57 | 50.0 | 3.50e-01 | 93.3% | 50.2% |
| 3579981 | 632.11.1.14 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › TMEM107 | 0.57 | 42.0 | 4.29e-01 | 76.0% | 81.0% |
| 4973147 | 103.4.1.30 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF28863 | 0.57 | 42.0 | 4.36e-01 | 78.8% | 84.2% |
| 3216480 | 5001.1.1.84 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz | 0.57 | 49.0 | 3.53e-01 | 95.2% | 44.3% |
| 4998770 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.57 | 45.0 | 4.06e-01 | 87.5% | 78.0% |
| 4565029 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 40.0 | 3.27e-01 | 75.0% | 77.5% |
| 5006471 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.55 | 46.0 | 3.96e-01 | 91.3% | 58.2% |
| 3272544 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.55 | 47.0 | 3.92e-01 | 95.2% | 77.4% |
| 1736237 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.55 | 46.0 | 4.27e-01 | 93.3% | 86.6% |
| 3659411 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.54 | 41.0 | 4.09e-01 | 80.8% | 80.9% |
| 3589565 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.54 | 46.0 | 3.65e-01 | 94.2% | 59.8% |
| 3793322 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 46.0 | 3.51e-01 | 93.3% | 72.6% |
| 5055566 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.53 | 46.0 | 4.53e-01 | 97.1% | 96.5% |
| 4617032 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 45.0 | 3.32e-01 | 98.1% | 37.5% |
| 4017411 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.53 | 40.0 | 3.56e-01 | 79.8% | 80.0% |
| 168374 | 191.1.1.26 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 | 0.52 | 39.0 | 3.81e-01 | 98.1% | 71.9% |
| 3325278 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 37.0 | 3.08e-01 | 74.0% | 42.2% |
| 3332048 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.51 | 39.0 | 3.82e-01 | 77.9% | 79.1% |
| 3672770 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.51 | 35.0 | 3.71e-01 | 76.0% | 76.8% |
| 3412019 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.51 | 37.0 | 3.93e-01 | 76.0% | 86.7% |
| 3974778 | 191.1.1.11 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_7 | 0.50 | 41.0 | 3.79e-01 | 94.2% | 67.4% |