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OR246918.1__WNA15544.1__X__00053

Bact-Vir

OR246918.1__WNA15544.1__X__00053

Identity

Accession:
OR246918 ↗
Kingdom:
phage

Quality

72.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acinetobacter_phage_HFM1

TaxID: 3073040

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-49
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 42.0 3.17e-01 70.8% 79.5%
4lqeA00 3.40.1350.140 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like 0.59 44.0 3.20e-01 85.4% 60.4%
2i5bA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 43.0 2.79e-01 85.4% 23.8%
1wduB00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.57 45.0 3.10e-01 100.0% 35.6%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 3.29e-01 89.6% 62.6%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 38.0 3.04e-01 70.8% 99.0%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.56 48.0 4.18e-01 100.0% 88.5%
1r89A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.56 40.0 3.02e-01 77.1% 38.3%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.56 43.0 3.66e-01 91.7% 72.5%
2fqmA01 6.10.140.830 Special › Helix non-globular › Helix Hairpins › 0.54 40.0 4.12e-01 83.3% 89.1%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 44.0 2.95e-01 91.7% 92.5%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.71e-01 95.8% 70.3%
2in3A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 40.0 3.41e-01 81.2% 48.1%
1tltA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 42.0 2.84e-01 87.5% 87.1%
3nwnA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.53 41.0 2.69e-01 100.0% 46.4%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 39.0 2.52e-01 89.6% 33.2%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.47e-01 95.8% 62.1%
4ktwA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 42.0 2.93e-01 91.7% 83.7%
3frmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 44.0 2.87e-01 100.0% 19.4%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.51 41.0 3.49e-01 100.0% 55.2%
1lc0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 44.0 3.17e-01 100.0% 34.7%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 3.32e-01 95.8% 68.5%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.51 37.0 3.12e-01 83.3% 79.3%
2pm6A00 1.25.40.1030 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 40.0 2.43e-01 93.8% 12.5%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 41.0 2.96e-01 89.6% 75.6%
3ihlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 40.0 2.66e-01 91.7% 81.2%
2o3iA01 3.40.1610.10 Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain 0.50 42.0 2.71e-01 95.8% 76.7%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939058 3457.1.1.3 ↗ alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II 0.60 47.0 3.04e-01 89.6% 26.4%
5035119 331.16.1.1 ↗ a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 0.60 48.0 4.11e-01 100.0% 57.8%
3680215 109.4.1.880 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LTN1_E3_ligase_6th 0.59 46.0 2.62e-01 93.8% 52.2%
5033874 2008.1.1.221 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Endonuc_Holl 0.57 46.0 4.15e-01 97.9% 62.7%
4029049 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.57 43.0 2.57e-01 85.4% 10.8%
3741989 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 48.0 2.80e-01 95.8% 18.7%
3260669 5.1.4.155 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 0.56 48.0 2.78e-01 97.9% 29.2%
4001872 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.55 46.0 3.06e-01 91.7% 34.6%
4202176 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.55 46.0 3.14e-01 95.8% 34.7%
5001238 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 43.0 3.50e-01 97.9% 65.5%
3642693 101.11.1.7 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › RNase_PH 0.54 46.0 3.81e-01 100.0% 62.2%
3212411 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 45.0 2.95e-01 100.0% 50.6%
3285272 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.54 43.0 3.00e-01 100.0% 32.3%
3700743 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 40.0 3.57e-01 87.5% 55.7%
3707684 243.11.1.0 ↗ a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein 0.53 40.0 3.66e-01 87.5% 60.0%
3656580 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.53 41.0 2.88e-01 89.6% 56.0%
4992891 331.16.1.1 ↗ a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 0.52 45.0 3.65e-01 100.0% 52.0%
4989431 2004.1.1.97 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.52 41.0 2.81e-01 95.8% 20.9%
5066497 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.52 41.0 2.86e-01 97.9% 76.8%
3903430 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.51 41.0 3.40e-01 87.5% 61.2%
184667 331.16.1.1 ↗ a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 0.51 41.0 3.49e-01 100.0% 55.2%
4933213 375.1.1.31 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.50 38.0 3.39e-01 83.3% 84.3%
3238074 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.50 40.0 2.70e-01 97.9% 34.1%