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OR253901.1__WNM73602.1__SEA_SOLLERTIA_13__00013

Bact-Vir

OR253901.1__WNM73602.1__SEA_SOLLERTIA_13__00013

Identity

Accession:
OR253901 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 65-131
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.84 60.0 6.41e-01 74.6% 100.0%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.80 62.0 5.45e-01 89.6% 57.7%
2dofA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.78 69.0 6.38e-01 98.5% 82.4%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.76 54.0 4.16e-01 74.6% 44.8%
3o3mB01 1.20.1270.370 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.76 49.0 4.22e-01 71.6% 43.7%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.74 52.0 5.42e-01 73.1% 86.9%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 4.95e-01 79.1% 80.0%
4nmyA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.72 55.0 3.93e-01 82.1% 74.1%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 52.0 5.41e-01 77.6% 93.3%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.71 56.0 4.31e-01 85.1% 49.0%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.85e-01 79.1% 81.7%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 4.60e-01 79.1% 74.7%
2hydA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.68 48.0 3.01e-01 73.1% 16.7%
1t6jA03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.67 52.0 4.55e-01 85.1% 73.8%
3f1bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 54.0 4.01e-01 91.0% 63.9%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.67 47.0 4.30e-01 74.6% 66.7%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 50.0 5.07e-01 86.6% 82.4%
2c42A06 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.66 49.0 3.00e-01 77.6% 49.6%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.66 41.0 3.94e-01 70.1% 54.5%
1abvA00 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.66 51.0 4.50e-01 86.6% 65.7%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.64 53.0 4.65e-01 91.0% 73.7%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 44.0 4.41e-01 79.1% 70.4%
3dtoA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.63 43.0 4.01e-01 77.6% 55.7%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.63 49.0 3.98e-01 89.6% 44.2%
5domA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.62 44.0 4.05e-01 76.1% 72.2%
3ik4B01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 49.0 4.11e-01 88.1% 50.8%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 50.0 4.40e-01 91.0% 93.1%
2raeA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 53.0 4.20e-01 98.5% 65.7%
2vqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.60 47.0 3.63e-01 89.6% 68.3%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.59 45.0 3.54e-01 85.1% 80.7%
2h7bA01 1.20.120.1110 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain 0.59 42.0 3.81e-01 77.6% 68.8%
1oj6A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 43.0 3.41e-01 80.6% 91.8%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 45.0 3.77e-01 88.1% 50.4%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 42.0 4.07e-01 79.1% 84.6%
2lrdA00 1.10.10.1840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 39.0 4.02e-01 70.1% 77.0%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.57 44.0 4.26e-01 82.1% 94.7%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 42.0 3.42e-01 80.6% 87.9%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 41.0 3.96e-01 79.1% 85.2%
2wy4A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 46.0 3.69e-01 91.0% 91.4%
3ubcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 43.0 3.54e-01 85.1% 90.8%
1mhyG02 1.20.1280.30 Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 0.56 43.0 4.26e-01 88.1% 91.8%
1urvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 43.0 3.40e-01 89.6% 51.9%
2d2mD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 45.0 3.61e-01 94.0% 56.6%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 38.0 3.30e-01 80.6% 47.2%
3tixB03 3.40.50.11490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 38.0 3.04e-01 77.6% 43.0%
7qocA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 41.0 3.04e-01 85.1% 40.1%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 40.0 3.85e-01 80.6% 76.0%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 38.0 3.50e-01 82.1% 73.2%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3477131 101.1.1.227 alpha arrays › HTH › HTH › Three-helical HTH › HTH_NOL4_2nd 0.85 65.0 6.45e-01 82.1% 92.9%
3839206 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.83 62.0 5.83e-01 79.1% 81.2%
3389549 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.83 65.0 5.84e-01 83.6% 80.0%
3657981 198.1.1.16 alpha arrays › Saposin-like › Saposin-like › Saposin-like › HTH_70 0.82 65.0 6.07e-01 83.6% 83.7%
3993576 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.80 63.0 4.67e-01 85.1% 38.8%
4013216 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 60.0 6.26e-01 80.6% 98.3%
4953832 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.78 57.0 6.20e-01 77.6% 94.5%
4255518 4973.1.1.0 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core 0.78 61.0 5.73e-01 83.6% 75.0%
3236431 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 5.90e-01 85.1% 78.6%
5036428 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.77 62.0 4.45e-01 86.6% 34.4%
3337658 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.77 60.0 4.34e-01 85.1% 34.6%
4595954 101.11.1.0 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.76 59.0 5.47e-01 83.6% 83.5%
4304583 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 58.0 5.89e-01 80.6% 100.0%
3988631 4973.1.1.0 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core 0.75 63.0 6.06e-01 91.0% 81.3%
3783147 101.1.2.212 alpha arrays › HTH › HTH › winged helix domain › Cac1_C 0.74 58.0 5.72e-01 83.6% 90.0%
3877844 529.1.1.2 few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › BSMAP 0.73 64.0 5.75e-01 95.5% 76.7%
3599563 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 52.0 4.76e-01 76.1% 58.9%
4988076 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 55.0 5.52e-01 82.1% 100.0%
4111666 610.3.1.1 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey 0.73 56.0 4.13e-01 85.1% 37.3%
4579424 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.72 48.0 3.27e-01 70.1% 20.4%
3504507 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.72 63.0 4.50e-01 95.5% 54.6%
3573652 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 51.0 5.60e-01 76.1% 100.0%
3836280 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 53.0 5.25e-01 79.1% 100.0%
1322519 101.1.2.188 alpha arrays › HTH › HTH › winged helix domain › Roquin_1_2-like_ROQ 0.71 55.0 4.95e-01 85.1% 64.2%
3352046 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.71 51.0 4.44e-01 79.1% 51.0%
3580853 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.60e-01 88.1% 98.5%
4973028 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 5.56e-01 95.5% 95.0%
4432991 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.68 57.0 3.67e-01 100.0% 19.7%
3590074 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 4.28e-01 83.6% 48.8%
3738994 168.1.1.1 alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 0.67 54.0 3.94e-01 89.6% 37.9%
3938065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 5.02e-01 83.6% 97.3%
3366917 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.67 50.0 5.43e-01 80.6% 98.2%
3814136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 5.53e-01 82.1% 100.0%
3303852 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 51.0 4.78e-01 85.1% 90.6%
3890162 101.1.2.526 alpha arrays › HTH › HTH › winged helix domain › PF27602 0.66 51.0 4.98e-01 85.1% 100.0%
3682237 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.66 50.0 4.31e-01 80.6% 85.4%
4963799 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.66 50.0 4.32e-01 82.1% 53.3%
3781503 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 45.0 4.80e-01 73.1% 87.3%
5048461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 5.00e-01 92.5% 98.8%
3660212 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 45.0 4.27e-01 79.1% 58.8%
3618188 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.64 47.0 4.03e-01 79.1% 50.9%
3933184 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.63 50.0 4.85e-01 88.1% 85.3%
3991367 101.1.2.558 alpha arrays › HTH › HTH › winged helix domain › CCD_aECM 0.62 46.0 4.93e-01 79.1% 96.4%
4531271 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.61 52.0 4.14e-01 100.0% 88.0%
3810921 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.61 46.0 4.84e-01 83.6% 96.7%
3618428 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.59 50.0 3.73e-01 95.5% 92.0%
5073173 3542.1.1.0 alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases 0.58 50.0 3.37e-01 100.0% 82.8%
51190 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.57 44.0 3.51e-01 89.6% 52.6%
3407816 3832.1.1.1 alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 0.55 49.0 3.65e-01 98.5% 84.7%
4997940 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.54 40.0 3.58e-01 80.6% 65.0%
3798462 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.50 42.0 3.19e-01 97.0% 45.1%