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OR253901.1__WNM73791.1__SEA_SOLLERTIA_245__00202

Bact-Vir

OR253901.1__WNM73791.1__SEA_SOLLERTIA_245__00202

Identity

Accession:
OR253901 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Karimacvirus› Streptomyces_phage_Sollertia

TaxID: 3075178

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-65
PDB
Domain cluster: rep: MH576968.1__AXH67380.1__SEA_WOFFORD_244__00199__D5-64
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 69.0 5.83e-01 100.0% 55.3%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 68.0 6.08e-01 100.0% 64.4%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 70.0 5.88e-01 100.0% 56.5%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 75.0 6.59e-01 100.0% 81.1%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 64.0 6.05e-01 100.0% 73.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 67.0 6.79e-01 100.0% 94.3%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 62.0 4.96e-01 100.0% 44.2%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 66.0 5.56e-01 100.0% 57.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 69.0 6.49e-01 100.0% 92.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 69.0 6.11e-01 100.0% 76.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 60.0 5.18e-01 100.0% 56.2%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 70.0 6.76e-01 100.0% 98.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 60.0 5.96e-01 100.0% 83.9%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 60.0 5.86e-01 100.0% 80.0%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 68.0 5.39e-01 100.0% 62.5%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 68.0 6.50e-01 100.0% 93.4%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 68.0 6.23e-01 100.0% 91.2%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 63.0 5.35e-01 100.0% 58.1%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.75 66.0 5.41e-01 100.0% 62.9%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 66.0 6.01e-01 100.0% 81.4%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 67.0 6.36e-01 100.0% 90.3%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 66.0 6.06e-01 100.0% 91.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 67.0 6.39e-01 100.0% 90.0%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 60.0 4.92e-01 94.3% 65.6%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.78e-01 100.0% 84.4%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 58.0 5.73e-01 94.3% 100.0%
3meuB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 60.0 5.41e-01 100.0% 74.3%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.67 59.0 4.83e-01 100.0% 81.8%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.66 48.0 5.21e-01 96.2% 97.7%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 57.0 4.97e-01 100.0% 63.9%
3h6zA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.48e-01 100.0% 50.0%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.61 54.0 3.59e-01 100.0% 47.1%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 44.0 3.88e-01 94.3% 53.8%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 46.0 3.70e-01 90.6% 91.4%
2w91A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.51e-01 83.0% 91.3%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 43.0 3.27e-01 86.8% 32.8%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.75e-01 100.0% 68.2%
2k5gA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 41.0 2.97e-01 86.8% 33.3%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 43.0 3.32e-01 94.3% 74.1%
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.54 45.0 3.02e-01 96.2% 25.8%
1nykA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.54 44.0 3.24e-01 94.3% 69.2%
1cboA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 42.0 2.70e-01 96.2% 65.7%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 43.0 2.67e-01 92.5% 39.7%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.05e-01 86.8% 33.8%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.53e-01 98.1% 58.7%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.00e-01 86.8% 35.4%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 3.32e-01 100.0% 65.5%
4wedA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 42.0 2.77e-01 98.1% 37.1%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.51 40.0 2.84e-01 88.7% 96.0%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 3.09e-01 94.3% 66.0%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 40.0 2.54e-01 94.3% 21.3%
4fajA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.50 40.0 3.20e-01 96.2% 91.9%
2x5fA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 41.0 3.44e-01 98.1% 66.3%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.87 67.0 5.79e-01 98.1% 55.0%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.86 67.0 6.89e-01 98.1% 88.0%
2106277 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.85 69.0 5.18e-01 100.0% 37.9%
4110119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.85 70.0 5.38e-01 100.0% 42.7%
3624441 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.84 69.0 4.98e-01 100.0% 33.6%
4002679 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.84 69.0 5.17e-01 100.0% 39.2%
3480822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 69.0 7.08e-01 100.0% 94.0%
3507338 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 66.0 6.31e-01 100.0% 75.0%
3508441 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 69.0 5.62e-01 100.0% 50.5%
3935130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 68.0 6.72e-01 100.0% 85.5%
3855972 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.82 66.0 6.18e-01 100.0% 70.8%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.81 65.0 6.09e-01 100.0% 70.8%
3427504 4.1.1.150 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3123 0.81 72.0 6.57e-01 100.0% 92.9%
3622137 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 66.0 5.46e-01 100.0% 52.2%
3535268 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 66.0 5.36e-01 100.0% 49.5%
3496659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 66.0 6.35e-01 100.0% 78.3%
4078120 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.80 71.0 7.01e-01 100.0% 92.7%
3781710 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.80 70.0 6.05e-01 100.0% 63.7%
3926207 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 68.0 6.80e-01 100.0% 94.3%
3768095 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 65.0 5.28e-01 100.0% 49.5%
3883161 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 64.0 5.36e-01 100.0% 52.2%
3218201 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 71.0 6.18e-01 100.0% 91.3%
3879068 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 64.0 5.45e-01 100.0% 55.3%
3571064 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 63.0 5.42e-01 100.0% 55.3%
3881121 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 64.0 5.15e-01 100.0% 47.0%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.79 69.0 6.15e-01 100.0% 69.9%
3723465 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.79 69.0 4.94e-01 100.0% 35.2%
3885050 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.78 68.0 4.65e-01 100.0% 29.1%
3826751 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 71.0 6.14e-01 100.0% 72.5%
3407820 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 61.0 5.20e-01 100.0% 52.9%
3508319 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 66.0 6.16e-01 100.0% 76.9%
5051313 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.50e-01 100.0% 80.0%
3502388 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 63.0 5.57e-01 100.0% 62.7%
3259841 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 71.0 6.42e-01 100.0% 90.0%
3920726 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 62.0 5.04e-01 100.0% 47.0%
3624228 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 71.0 6.24e-01 100.0% 94.7%
3596676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 62.0 5.20e-01 100.0% 52.2%
3448327 4.1.1.150 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3123 0.77 68.0 6.24e-01 100.0% 87.1%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 5.86e-01 100.0% 97.6%
4023315 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.77 67.0 5.65e-01 100.0% 72.2%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.76 65.0 4.68e-01 100.0% 34.5%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 60.0 5.42e-01 100.0% 62.7%
4483091 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 69.0 5.43e-01 100.0% 62.9%
3407853 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 59.0 4.95e-01 100.0% 50.0%
4493776 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 69.0 6.19e-01 98.1% 97.1%
3407827 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 59.0 5.05e-01 100.0% 52.9%
3517030 4.1.1.232 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 0.76 68.0 6.02e-01 100.0% 84.0%
3174580 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.64e-01 100.0% 75.3%
3737805 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 68.0 6.02e-01 100.0% 94.7%
3547089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 60.0 5.04e-01 100.0% 52.2%
3575253 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 65.0 5.88e-01 94.3% 84.3%
3669492 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 67.0 4.87e-01 100.0% 40.0%
3472332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 59.0 5.85e-01 100.0% 83.6%
3658643 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 64.0 4.70e-01 100.0% 40.0%
3908017 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.73 64.0 5.62e-01 100.0% 72.5%
3594811 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 66.0 6.17e-01 100.0% 98.5%
3710893 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 64.0 4.81e-01 100.0% 52.3%
3707929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 4.55e-01 100.0% 42.5%
3815495 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 64.0 5.88e-01 100.0% 80.0%
515 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 64.0 5.31e-01 100.0% 98.9%
3630782 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 63.0 4.60e-01 100.0% 42.1%
3600929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.40e-01 100.0% 72.9%
3368700 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 63.0 4.95e-01 100.0% 58.2%
3302166 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 63.0 5.92e-01 100.0% 81.5%
2831843 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 4.50e-01 100.0% 45.2%
3511551 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.93e-01 100.0% 86.7%
3781440 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.70 62.0 5.41e-01 100.0% 70.0%
3824699 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 63.0 5.85e-01 100.0% 81.5%
3810560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.59e-01 100.0% 91.4%
1527468 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 59.0 4.70e-01 100.0% 46.8%
3501312 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.52e-01 100.0% 86.2%
3351118 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 61.0 4.17e-01 100.0% 30.3%
2141406 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.68 60.0 4.43e-01 100.0% 43.0%
3954938 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.55e-01 100.0% 81.5%
5030261 2.1.1.363 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2101 0.66 50.0 4.69e-01 81.1% 100.0%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.13e-01 100.0% 80.0%
4016022 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.96e-01 100.0% 76.0%
3234951 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.64 51.0 3.34e-01 92.5% 30.4%
5027082 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 48.0 3.72e-01 86.8% 66.4%
3332613 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.60 51.0 3.98e-01 100.0% 43.3%
3508683 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 51.0 3.90e-01 100.0% 78.5%
3491988 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 45.0 2.79e-01 94.3% 21.6%
3939687 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.55 46.0 3.88e-01 100.0% 60.0%
4165306 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.55 43.0 3.58e-01 92.5% 51.4%
3254029 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.55 41.0 3.44e-01 83.0% 94.7%