←Back to structures
OR253906.1__WNM74294.1__SEA_THIMANN_31__00031
Bact-VirOR253906.1__WNM74294.1__SEA_THIMANN_31__00031
Identity
- Accession:
- OR253906 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Taxonomy
TaxID: 3075160
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-81
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13384.13 best | HTH_23 | 30.0 | 4.70e-07 | 75.9% | 70.0% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.92 | 61.0 | 6.30e-01 | 74.1% | 72.7% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.88 | 56.0 | 6.32e-01 | 75.9% | 84.4% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 58.0 | 6.00e-01 | 70.7% | 74.1% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.83 | 62.0 | 5.10e-01 | 79.3% | 45.5% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 54.0 | 5.51e-01 | 74.1% | 69.6% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.82 | 57.0 | 4.57e-01 | 77.6% | 38.5% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 60.0 | 6.26e-01 | 77.6% | 96.3% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 56.0 | 4.13e-01 | 72.4% | 76.8% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 54.0 | 3.46e-01 | 74.1% | 21.5% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.74 | 46.0 | 5.01e-01 | 70.7% | 78.3% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 52.0 | 5.16e-01 | 75.9% | 82.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 49.0 | 4.06e-01 | 70.7% | 42.7% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.71 | 57.0 | 4.26e-01 | 87.9% | 50.7% |
| 4cgrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 52.0 | 3.58e-01 | 79.3% | 51.8% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 49.0 | 4.67e-01 | 74.1% | 68.7% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 55.0 | 5.16e-01 | 86.2% | 98.6% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 52.0 | 5.26e-01 | 81.0% | 100.0% |
| 4kibA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 55.0 | 4.65e-01 | 89.7% | 91.9% |
| 2a61B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 3.87e-01 | 81.0% | 39.4% |
| 3bddD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 53.0 | 4.03e-01 | 84.5% | 42.4% |
| 2zb9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 47.0 | 4.99e-01 | 72.4% | 100.0% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 3.54e-01 | 75.9% | 35.3% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 48.0 | 4.37e-01 | 81.0% | 57.9% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 46.0 | 4.52e-01 | 74.1% | 65.6% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 48.0 | 4.70e-01 | 82.8% | 69.2% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 47.0 | 3.63e-01 | 75.9% | 38.7% |
| 2id3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 44.0 | 4.69e-01 | 70.7% | 100.0% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 4.72e-01 | 91.4% | 100.0% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 38.0 | 3.23e-01 | 87.9% | 36.2% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 50.0 | 3.74e-01 | 82.8% | 40.8% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 50.0 | 3.86e-01 | 86.2% | 86.6% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 44.0 | 4.81e-01 | 74.1% | 97.9% |
| 1etkA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 49.0 | 4.56e-01 | 86.2% | 69.3% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 52.0 | 3.61e-01 | 91.4% | 48.8% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 45.0 | 3.51e-01 | 77.6% | 36.6% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 3.81e-01 | 87.9% | 49.3% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.38e-01 | 91.4% | 95.7% |
| 7cluA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 4.22e-01 | 84.5% | 89.9% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.26e-01 | 77.6% | 71.4% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 3.98e-01 | 74.1% | 60.9% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 3.39e-01 | 84.5% | 60.9% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 43.0 | 4.57e-01 | 79.3% | 100.0% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 52.0 | 3.81e-01 | 100.0% | 48.4% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 3.59e-01 | 70.7% | 100.0% |
| 3cjdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 47.0 | 3.33e-01 | 91.4% | 44.5% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 3.47e-01 | 93.1% | 75.5% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 4.38e-01 | 100.0% | 100.0% |
| 3he0B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 45.0 | 3.20e-01 | 91.4% | 43.3% |
| 2dg8D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 41.0 | 3.05e-01 | 91.4% | 63.0% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 3.37e-01 | 75.9% | 97.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051712 | 101.1.4.90 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 | 0.95 | 63.0 | 6.55e-01 | 70.7% | 72.7% |
| 4533441 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.93 | 65.0 | 5.35e-01 | 72.4% | 44.2% |
| 3953011 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.93 | 60.0 | 6.22e-01 | 70.7% | 70.9% |
| 3590753 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 61.0 | 6.56e-01 | 70.7% | 80.0% |
| 3983411 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.90 | 57.0 | 5.17e-01 | 70.7% | 50.7% |
| 3834548 | 101.1.3.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 | 0.89 | 59.0 | 5.68e-01 | 70.7% | 61.5% |
| 3410592 | 101.1.8.25 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_psq | 0.88 | 69.0 | 7.12e-01 | 86.2% | 89.1% |
| 2792505 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.88 | 62.0 | 6.30e-01 | 74.1% | 75.4% |
| 3793393 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 60.0 | 5.35e-01 | 75.9% | 52.5% |
| 3389609 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.86 | 61.0 | 5.69e-01 | 75.9% | 61.4% |
| 4863786 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.86 | 58.0 | 5.98e-01 | 74.1% | 74.5% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.86 | 58.0 | 5.60e-01 | 70.7% | 63.1% |
| 4977146 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 69.0 | 5.65e-01 | 87.9% | 50.0% |
| 3404418 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.84 | 56.0 | 5.22e-01 | 70.7% | 57.1% |
| 4413387 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.84 | 58.0 | 5.59e-01 | 72.4% | 80.0% |
| 4520564 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.82 | 61.0 | 5.38e-01 | 77.6% | 80.0% |
| 4280807 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.82 | 55.0 | 5.62e-01 | 70.7% | 72.7% |
| 5051680 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.80 | 65.0 | 5.90e-01 | 94.8% | 66.3% |
| 3961604 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.79 | 56.0 | 4.58e-01 | 74.1% | 83.0% |
| 3978988 | 7565.1.1.0 ↗ | a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like | 0.78 | 56.0 | 3.82e-01 | 81.0% | 23.9% |
| 3477654 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.78 | 52.0 | 5.34e-01 | 70.7% | 72.7% |
| None | — | 0.77 | 55.0 | 3.49e-01 | 74.1% | 21.6% | |
| 3738604 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 59.0 | 4.83e-01 | 84.5% | 50.5% |
| 4174590 | 101.1.2.61 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 | 0.75 | 62.0 | 5.95e-01 | 93.1% | 78.5% |
| 5050966 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.75 | 62.0 | 5.32e-01 | 93.1% | 58.9% |
| 4979101 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 53.0 | 5.10e-01 | 75.9% | 66.2% |
| 5002651 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.75 | 55.0 | 4.70e-01 | 79.3% | 56.8% |
| 5013438 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.75 | 53.0 | 5.29e-01 | 75.9% | 73.3% |
| 5072014 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.74 | 58.0 | 5.35e-01 | 86.2% | 69.3% |
| 5064868 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.74 | 57.0 | 4.99e-01 | 86.2% | 57.8% |
| 3786618 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.71 | 65.0 | 4.99e-01 | 100.0% | 64.5% |
| 4185879 | 101.1.2.210 ↗ | alpha arrays › HTH › HTH › winged helix domain › CggR_N | 0.67 | 50.0 | 4.48e-01 | 81.0% | 64.7% |
| 4928999 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.24e-01 | 86.2% | 98.9% |
| 4165105 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.56 | 44.0 | 3.93e-01 | 87.9% | 96.5% |
| 3279376 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.54 | 44.0 | 3.89e-01 | 96.6% | 95.8% |