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OR253907.1__WNM74389.1__SEA_GUETZIE_46__00045
Bact-VirOR253907.1__WNM74389.1__SEA_GUETZIE_46__00045
Identity
- Accession:
- OR253907 ↗
- Kingdom:
- phage
Quality
67.0
mean pLDDT
Taxonomy
TaxID: 3075161
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 19-114
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hfvA02 | 6.10.280.170 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Substrate of the Dot/Icm secretion system | 0.63 | 42.0 | 4.90e-01 | 99.0% | 93.0% |
| 2zttA00 | 6.10.140.720 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 29.0 | 3.22e-01 | 87.5% | 57.5% |
| 2o01L01 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.56 | 39.0 | 3.80e-01 | 86.5% | 63.1% |
| 1vw3D00 | 3.40.1370.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L4; Chain: A; › Ribosomal protein L4/L1 | 0.52 | 31.0 | 2.36e-01 | 83.3% | 23.4% |
| 2gz4A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 40.0 | 3.26e-01 | 84.4% | 90.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276479 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.73 | 41.0 | 3.14e-01 | 100.0% | 26.3% |
| 4021456 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.69 | 34.0 | 3.22e-01 | 88.5% | 39.1% |
| 3988581 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 47.0 | 4.83e-01 | 100.0% | 80.0% |
| 3365211 | 304.39.1.2 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Msl2-3_C | 0.58 | 27.0 | 3.05e-01 | 90.6% | 53.3% |
| 4654615 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.55 | 41.0 | 3.08e-01 | 78.1% | 36.1% |
| 4100565 | 243.9.1.2 ↗ | a+b two layers › Cystatin-like › Nuclease A inhibitor (NuiA)-related › Nuclease A inhibitor (NuiA)-related › Maf1 | 0.53 | 37.0 | 2.94e-01 | 82.3% | 35.5% |
| 3460582 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.53 | 47.0 | 4.18e-01 | 100.0% | 97.1% |
| 3998550 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.53 | 39.0 | 3.07e-01 | 99.0% | 37.0% |
| 3895743 | 3615.1.1.7 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20 | 0.52 | 47.0 | 3.77e-01 | 100.0% | 50.5% |
| 3639774 | 805.1.1.2 ↗ | a+b complex topology › 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain › 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain › 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain › NadN_nucleosid_C | 0.52 | 39.0 | 3.04e-01 | 81.2% | 97.8% |
| 5056727 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.52 | 46.0 | 3.54e-01 | 95.8% | 85.4% |
| 3531784 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.51 | 37.0 | 3.47e-01 | 85.4% | 61.7% |
| 4938398 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.51 | 48.0 | 4.11e-01 | 100.0% | 69.0% |
| 4001488 | 1081.1.1.1 ↗ | alpha arrays › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › hDGE_amylase | 0.51 | 47.0 | 3.88e-01 | 100.0% | 70.3% |
| 3487911 | 3954.1.1.0 ↗ | alpha arrays › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) | 0.50 | 44.0 | 3.08e-01 | 99.0% | 83.7% |