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OR253909.1__WNM74520.1__SEA_MOLEFICENT_16__00016
Bact-VirOR253909.1__WNM74520.1__SEA_MOLEFICENT_16__00016
Identity
- Accession:
- OR253909 ↗
- Kingdom:
- phage
Quality
70.8
mean pLDDT
Taxonomy
TaxID: 3075163
Cluster
View cluster (69 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-57_116-227
D2
medium
residues 58-115
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rklA00 | 6.10.140.1640 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 56.0 | 4.96e-01 | 81.0% | 53.8% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.75 | 54.0 | 5.28e-01 | 81.0% | 70.3% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.74 | 55.0 | 4.91e-01 | 81.0% | 56.8% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 55.0 | 4.90e-01 | 81.0% | 84.0% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 54.0 | 5.19e-01 | 81.0% | 86.6% |
| 1yq1A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.72 | 53.0 | 4.24e-01 | 81.0% | 41.1% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.69 | 52.0 | 5.21e-01 | 81.0% | 91.4% |
| 1vq8P03 | 1.10.1200.60 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.69 | 49.0 | 4.98e-01 | 98.3% | 80.0% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.68 | 51.0 | 4.85e-01 | 82.8% | 67.6% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 53.0 | 5.04e-01 | 89.7% | 95.9% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.68 | 62.0 | 5.00e-01 | 100.0% | 71.4% |
| 4a2nB00 | 1.20.120.1630 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 50.0 | 3.53e-01 | 82.8% | 63.5% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 46.0 | 4.88e-01 | 100.0% | 82.7% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.66 | 48.0 | 4.49e-01 | 81.0% | 79.2% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 48.0 | 3.96e-01 | 81.0% | 43.8% |
| 7krzA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 44.0 | 3.87e-01 | 100.0% | 47.6% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.65 | 48.0 | 4.46e-01 | 81.0% | 64.5% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.65 | 50.0 | 4.64e-01 | 84.5% | 78.4% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.64 | 54.0 | 4.62e-01 | 100.0% | 62.7% |
| 2ohfA03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.63 | 54.0 | 5.02e-01 | 100.0% | 89.3% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 45.0 | 4.28e-01 | 82.8% | 79.5% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.61 | 44.0 | 3.72e-01 | 77.6% | 57.4% |
| 2b3tB01 | 6.10.140.1980 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 48.0 | 4.75e-01 | 93.1% | 98.5% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 44.0 | 3.04e-01 | 81.0% | 22.0% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.60 | 48.0 | 3.87e-01 | 94.8% | 81.5% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.43e-01 | 82.8% | 80.7% |
| 4b7yD00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 43.0 | 3.77e-01 | 82.8% | 66.0% |
| 2reoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 40.0 | 2.79e-01 | 74.1% | 74.9% |
| 1gvnA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 50.0 | 4.43e-01 | 100.0% | 75.9% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 43.0 | 4.02e-01 | 84.5% | 71.8% |
| 4xomB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 49.0 | 3.42e-01 | 100.0% | 60.0% |
| 5x2bD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 39.0 | 2.54e-01 | 74.1% | 56.2% |
| 3fhnA05 | 1.10.10.2270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dsl1p vesicle tethering complex, Tip20p subunit, domain E | 0.53 | 38.0 | 3.66e-01 | 75.9% | 73.1% |
| 3kw0A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.51 | 45.0 | 3.16e-01 | 100.0% | 79.9% |
| 1v66A00 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.51 | 42.0 | 4.05e-01 | 96.6% | 81.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3468553 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.79 | 55.0 | 4.03e-01 | 81.0% | 28.1% |
| 4027013 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.79 | 47.0 | 4.89e-01 | 81.0% | 63.6% |
| 3258522 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.76 | 55.0 | 5.28e-01 | 82.8% | 67.7% |
| 4855060 | 601.2.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes | 0.74 | 56.0 | 5.54e-01 | 81.0% | 98.4% |
| 4562001 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.74 | 56.0 | 5.11e-01 | 81.0% | 64.0% |
| 3252860 | 609.1.1.0 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase | 0.73 | 55.0 | 4.12e-01 | 81.0% | 55.7% |
| 4039320 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.71 | 53.0 | 4.79e-01 | 81.0% | 60.0% |
| 3700198 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.70 | 63.0 | 4.84e-01 | 100.0% | 60.8% |
| 4597937 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.70 | 53.0 | 4.75e-01 | 81.0% | 60.0% |
| 3964038 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.69 | 52.0 | 4.77e-01 | 81.0% | 64.0% |
| 4819006 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.69 | 51.0 | 3.29e-01 | 81.0% | 18.3% |
| 4182116 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.69 | 52.0 | 4.56e-01 | 81.0% | 56.5% |
| 60297 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.69 | 51.0 | 4.73e-01 | 81.0% | 62.7% |
| 3730372 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.67 | 49.0 | 3.43e-01 | 81.0% | 23.6% |
| 3833154 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.67 | 52.0 | 4.50e-01 | 84.5% | 66.7% |
| 3236976 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 59.0 | 4.34e-01 | 100.0% | 44.7% |
| 3621201 | 10.12.1.38 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PCO_ADO | 0.62 | 45.0 | 3.09e-01 | 82.8% | 19.8% |
| 4002640 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 45.0 | 2.79e-01 | 81.0% | 21.9% |
| 3458947 | 604.5.1.72 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › DUF4220 | 0.59 | 48.0 | 3.24e-01 | 94.8% | 48.6% |
| 3839989 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.58 | 44.0 | 3.25e-01 | 98.3% | 29.1% |
| 3928087 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.57 | 43.0 | 4.09e-01 | 82.8% | 70.0% |
| 4133362 | 632.11.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › Yae1_N | 0.54 | 45.0 | 3.96e-01 | 100.0% | 74.7% |
| 3948631 | 192.29.1.56 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › YihI | 0.53 | 38.0 | 3.86e-01 | 81.0% | 92.7% |
| 3576201 | 10.12.1.38 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PCO_ADO | 0.51 | 45.0 | 3.45e-01 | 100.0% | 80.0% |