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OR253911.1__WNM74672.1__SEA_PINKIEPIE_9__00009
Bact-VirOR253911.1__WNM74672.1__SEA_PINKIEPIE_9__00009
Identity
- Accession:
- OR253911 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stanwilliamsviridae›
Samistivirus›
Streptomyces_phage_PinkiePie
TaxID: 3075177
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-46
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.82 | 72.0 | 5.42e-01 | 100.0% | 69.0% |
| 4heoA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.81 | 55.0 | 5.19e-01 | 71.7% | 60.0% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.80 | 54.0 | 5.15e-01 | 71.7% | 63.6% |
| 3dfzA02 | 1.10.8.610 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › SirC, precorrin-2 dehydrogenase, C-terminal helical domain-like | 0.79 | 54.0 | 4.60e-01 | 71.7% | 44.6% |
| 1l6nA02 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.75 | 62.0 | 4.51e-01 | 95.7% | 34.4% |
| 3k2nA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.74 | 64.0 | 4.33e-01 | 100.0% | 91.5% |
| 2h56A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.73 | 49.0 | 3.68e-01 | 71.7% | 63.2% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.71 | 57.0 | 3.96e-01 | 97.8% | 27.0% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.71 | 58.0 | 5.15e-01 | 100.0% | 72.6% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.66 | 52.0 | 3.95e-01 | 100.0% | 37.7% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.65 | 55.0 | 3.77e-01 | 100.0% | 29.4% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.91e-01 | 100.0% | 91.1% |
| 3lxzB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 52.0 | 3.87e-01 | 100.0% | 42.8% |
| 3cz6A01 | 1.20.120.1480 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 53.0 | 4.07e-01 | 95.7% | 52.9% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 50.0 | 3.74e-01 | 100.0% | 35.8% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 51.0 | 4.99e-01 | 100.0% | 88.7% |
| 6wb9201 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 50.0 | 3.15e-01 | 100.0% | 16.6% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 51.0 | 4.11e-01 | 100.0% | 89.1% |
| 1anxA04 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.61 | 50.0 | 4.47e-01 | 100.0% | 75.0% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.24e-01 | 80.4% | 70.9% |
| 4akrA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.60 | 47.0 | 3.85e-01 | 100.0% | 43.4% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 44.0 | 3.36e-01 | 93.5% | 38.8% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.59 | 43.0 | 3.67e-01 | 80.4% | 60.5% |
| 2ygwA01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.59 | 46.0 | 3.43e-01 | 100.0% | 66.0% |
| 2o4cA03 | 3.30.1370.170 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Erythronate-4-phosphate dehydrogenase, dimerisation domain | 0.59 | 49.0 | 4.06e-01 | 97.8% | 100.0% |
| 6j9eD01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.58 | 45.0 | 3.45e-01 | 93.5% | 53.5% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 47.0 | 4.69e-01 | 100.0% | 95.8% |
| 2p58C00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 45.0 | 3.60e-01 | 95.7% | 62.5% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 46.0 | 4.41e-01 | 100.0% | 81.4% |
| 2ol5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 46.0 | 3.19e-01 | 95.7% | 64.5% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 45.0 | 3.04e-01 | 100.0% | 49.3% |
| 3m1yA02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.56 | 44.0 | 4.18e-01 | 87.0% | 73.7% |
| 5mv9A01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.55 | 42.0 | 3.07e-01 | 100.0% | 25.6% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 47.0 | 4.07e-01 | 100.0% | 88.0% |
| 2vxdA00 | 1.10.10.2100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain | 0.55 | 43.0 | 4.24e-01 | 100.0% | 100.0% |
| 3mw6B00 | 1.10.1710.10 | Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain | 0.55 | 44.0 | 3.65e-01 | 97.8% | 50.0% |
| 4j6oA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 45.0 | 2.90e-01 | 100.0% | 36.0% |
| 2o5rA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.54 | 36.0 | 3.65e-01 | 84.8% | 68.8% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.53 | 44.0 | 3.14e-01 | 100.0% | 50.9% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.50 | 36.0 | 3.59e-01 | 84.8% | 75.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616859 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.86 | 75.0 | 6.40e-01 | 100.0% | 61.3% |
| 4678110 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.78 | 54.0 | 4.46e-01 | 71.7% | 42.5% |
| 3261482 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.76 | 65.0 | 5.59e-01 | 100.0% | 60.0% |
| 3361122 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 61.0 | 6.16e-01 | 100.0% | 95.6% |
| 3326531 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.76 | 63.0 | 6.38e-01 | 97.8% | 97.8% |
| 2462402 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.73 | 60.0 | 4.02e-01 | 97.8% | 24.4% |
| 4856249 | 151.1.1.1 ↗ | alpha bundles › Hemocyanin-N › Hemocyanin-N › Hemocyanin-N › Hemocyanin_N | 0.72 | 58.0 | 5.26e-01 | 100.0% | 65.7% |
| 5003513 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.71 | 60.0 | 3.98e-01 | 97.8% | 25.3% |
| 3497435 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.71 | 64.0 | 4.62e-01 | 100.0% | 37.5% |
| 4946543 | 2004.1.3.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR_N | 0.71 | 57.0 | 3.86e-01 | 97.8% | 24.6% |
| 3588754 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.70 | 57.0 | 3.84e-01 | 97.8% | 23.6% |
| 4542284 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.69 | 55.0 | 3.62e-01 | 95.7% | 21.0% |
| 4947930 | 2004.1.3.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR_N | 0.68 | 53.0 | 3.70e-01 | 97.8% | 25.9% |
| 3410327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 57.0 | 4.66e-01 | 100.0% | 78.9% |
| 4887646 | 4030.1.1.2 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F-actin_cap_A | 0.66 | 53.0 | 5.12e-01 | 100.0% | 82.1% |
| 5042310 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.65 | 52.0 | 3.94e-01 | 100.0% | 35.6% |
| 5077789 | 101.1.2.948 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27297 | 0.65 | 53.0 | 4.14e-01 | 100.0% | 55.7% |
| 3494965 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 50.0 | 3.47e-01 | 100.0% | 23.1% |
| 4426999 | 563.1.1.0 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.64 | 53.0 | 4.42e-01 | 100.0% | 61.1% |
| 4987508 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.64 | 44.0 | 3.86e-01 | 76.1% | 45.3% |
| 3669380 | 109.4.1.1190 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_GCN1_C | 0.63 | 51.0 | 3.79e-01 | 100.0% | 36.4% |
| 4264669 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.63 | 51.0 | 3.58e-01 | 100.0% | 31.4% |
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.63 | 52.0 | 4.59e-01 | 100.0% | 68.0% |
| 4343255 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.62 | 48.0 | 3.08e-01 | 100.0% | 44.4% |
| 3367299 | 192.29.1.169 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › KIP1 | 0.61 | 43.0 | 3.56e-01 | 80.4% | 45.3% |
| 5018771 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.60 | 43.0 | 2.89e-01 | 78.3% | 41.1% |
| 5040242 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.59 | 47.0 | 3.83e-01 | 97.8% | 57.1% |
| 3261028 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.59 | 49.0 | 4.17e-01 | 100.0% | 67.1% |
| 5003145 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.56 | 49.0 | 3.14e-01 | 100.0% | 20.9% |
| 3224625 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.56 | 46.0 | 4.07e-01 | 100.0% | 81.3% |
| 4558680 | 101.1.2.807 ↗ | alpha arrays › HTH › HTH › winged helix domain › MC6 | 0.55 | 45.0 | 3.90e-01 | 100.0% | 77.5% |