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OR253914.1__WNM75057.1__SEA_MORRIGAN_12__00012

Bact-Vir

OR253914.1__WNM75057.1__SEA_MORRIGAN_12__00012

Identity

Accession:
OR253914 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Neferthenavirus› Microbacterium_phage_Morrigan

TaxID: 3035383

Cluster

View cluster (80 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-113
PDB
Domain cluster: rep: JN051154.1__AER59760.1__clP1_001__00001__D30-123
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mt1A07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.67 48.0 4.64e-01 90.2% 67.6%
2ckwA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.66 49.0 4.60e-01 92.4% 63.8%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.65 52.0 4.92e-01 89.1% 72.2%
5t3dA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.64 51.0 4.13e-01 87.0% 72.6%
1ab8A00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.60 50.0 4.05e-01 95.7% 48.0%
3h5xA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 42.0 3.94e-01 85.9% 58.6%
4zxwB01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.59 47.0 3.85e-01 85.9% 72.7%
1dofA01 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.59 45.0 3.32e-01 81.5% 89.3%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.58 51.0 4.00e-01 96.7% 91.3%
2dgzA01 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.58 48.0 4.86e-01 90.2% 93.3%
2nwlC00 1.10.3860.10 Mainly Alpha › Orthogonal Bundle › Proton glutamate symport protein › Sodium:dicarboxylate symporter 0.58 51.0 3.38e-01 100.0% 24.3%
7nmqA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.58 50.0 3.47e-01 100.0% 57.7%
6nifA01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.58 49.0 3.79e-01 93.5% 87.3%
7kw0A02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.57 47.0 3.95e-01 91.3% 74.8%
6w08A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.57 51.0 3.45e-01 100.0% 55.2%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.56 41.0 3.79e-01 77.2% 98.3%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.56 47.0 3.35e-01 98.9% 51.8%
7vkcA01 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.53 36.0 3.06e-01 70.7% 76.4%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 41.0 3.45e-01 87.0% 67.8%
8a5eD01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 33.0 3.57e-01 83.7% 74.7%
7l9pK01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.52 39.0 3.59e-01 78.3% 76.5%
3rrwB01 1.10.520.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › 0.52 44.0 3.47e-01 90.2% 48.9%
4i8oA04 6.10.250.2650 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 35.0 3.49e-01 79.3% 68.4%
2pb2B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 42.0 3.66e-01 91.3% 59.9%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4776306 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.68 55.0 4.44e-01 94.6% 45.3%
4025349 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.68 37.0 3.26e-01 70.7% 37.7%
5016606 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 43.0 3.79e-01 97.8% 42.1%
3471083 4018.1.1.0 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases 0.65 58.0 4.66e-01 100.0% 78.9%
3247408 304.48.1.4 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.64 52.0 3.30e-01 95.7% 17.6%
4022379 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 45.0 3.78e-01 73.9% 68.7%
3853513 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.63 40.0 2.79e-01 100.0% 21.1%
3506749 633.21.1.23 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.63 48.0 3.98e-01 82.6% 84.2%
3568034 5050.1.1.2 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 0.62 43.0 2.63e-01 97.8% 12.0%
3523603 633.23.1.39 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PF26158 0.62 49.0 4.06e-01 83.7% 86.3%
5001620 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.61 44.0 4.22e-01 75.0% 99.0%
4385210 633.21.1.18 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom 0.60 46.0 3.68e-01 82.6% 92.4%
3205804 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.59 52.0 4.04e-01 96.7% 88.3%
4498936 309.1.1.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.59 52.0 4.08e-01 98.9% 73.0%
4236657 633.21.1.18 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom 0.59 46.0 3.96e-01 85.9% 84.5%
3352429 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.59 52.0 4.06e-01 96.7% 93.3%
3721128 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.59 52.0 3.80e-01 95.7% 92.6%
4015693 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.59 53.0 4.01e-01 100.0% 91.9%
3674534 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.58 51.0 3.99e-01 96.7% 89.0%
3672413 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 38.0 3.85e-01 93.5% 66.7%
3194944 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.58 51.0 3.82e-01 96.7% 98.3%
3789599 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.58 51.0 3.99e-01 96.7% 92.8%
4932485 3261.1.1.0 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.58 35.0 4.27e-01 80.4% 100.0%
3742582 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.58 52.0 3.97e-01 98.9% 93.3%
3333315 633.6.1.8 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 0.57 44.0 3.38e-01 83.7% 62.7%
3993195 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.56 50.0 4.48e-01 98.9% 90.8%
3274214 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.56 50.0 3.96e-01 97.8% 57.8%
3481148 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.56 48.0 3.76e-01 94.6% 92.5%
4978506 3714.1.1.0 ↗ a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain 0.56 41.0 3.32e-01 96.7% 38.4%
3789405 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.55 47.0 3.58e-01 95.7% 95.2%
3297656 601.1.2.68 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DUF1218 0.55 38.0 3.17e-01 71.7% 70.3%
3810835 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.54 39.0 3.26e-01 75.0% 78.7%
3630540 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.53 39.0 2.79e-01 91.3% 26.8%
3511708 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.53 47.0 3.61e-01 98.9% 93.0%
3947950 235.1.1.33 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › PF31186 0.53 41.0 3.55e-01 88.0% 98.8%
5014663 2004.1.1.85 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.52 40.0 2.79e-01 83.7% 51.8%
4972502 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 38.0 2.92e-01 100.0% 35.1%
4989039 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.51 34.0 2.96e-01 70.7% 88.1%
3878887 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.50 45.0 3.16e-01 100.0% 59.7%
3473259 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.50 43.0 2.94e-01 98.9% 83.6%
3589150 2498.1.1.7 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3,Peptidase_M3_N 0.50 41.0 2.51e-01 89.1% 58.6%