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OR253916.1__WNM75317.1__SEA_AUSPICE_125__00106
Bact-VirOR253916.1__WNM75317.1__SEA_AUSPICE_125__00106
Identity
- Accession:
- OR253916 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Taxonomy
TaxID: 3075172
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.62 | 42.0 | 3.93e-01 | 89.7% | 57.7% |
| 5c9iD01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.61 | 52.0 | 3.72e-01 | 91.4% | 50.9% |
| 5mmiG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.60 | 38.0 | 3.39e-01 | 84.5% | 45.2% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.58 | 47.0 | 3.61e-01 | 93.1% | 66.4% |
| 3gr0D01 | 3.30.70.1780 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 28.0 | 3.30e-01 | 75.9% | 70.7% |
| 4hstA01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.55 | 46.0 | 3.42e-01 | 93.1% | 40.4% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.55 | 43.0 | 3.26e-01 | 91.4% | 37.2% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 37.0 | 3.03e-01 | 79.3% | 41.3% |
| 3ty2A00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.51 | 43.0 | 2.77e-01 | 89.7% | 44.4% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3726808 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.77 | 53.0 | 3.62e-01 | 70.7% | 25.0% |
| 3287147 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.71 | 46.0 | 3.24e-01 | 94.8% | 22.9% |
| 3595048 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 48.0 | 3.07e-01 | 70.7% | 37.8% |
| 4890753 | 4342.1.1.2 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like › YqgF | 0.67 | 45.0 | 3.12e-01 | 70.7% | 41.8% |
| 3627409 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.65 | 55.0 | 3.80e-01 | 93.1% | 39.0% |
| 5077287 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.63 | 53.0 | 3.41e-01 | 91.4% | 91.6% |
| 4561249 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.62 | 47.0 | 3.63e-01 | 81.0% | 99.2% |
| 1238064 | 101.1.1.20 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A | 0.60 | 39.0 | 3.44e-01 | 91.4% | 45.3% |
| 3934420 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.59 | 54.0 | 3.62e-01 | 100.0% | 92.9% |
| 3614862 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.59 | 49.0 | 3.22e-01 | 89.7% | 38.3% |
| 3098534 | 101.1.1.20 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A | 0.59 | 38.0 | 3.02e-01 | 91.4% | 31.0% |
| 4067342 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.59 | 51.0 | 3.17e-01 | 100.0% | 46.1% |
| 3517172 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 47.0 | 2.90e-01 | 87.9% | 37.4% |
| 2126757 | 170.2.1.1 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p24 | 0.58 | 47.0 | 3.61e-01 | 93.1% | 66.4% |
| 4203031 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 41.0 | 3.09e-01 | 77.6% | 75.2% |
| 3798928 | 59.1.4.2 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 | 0.57 | 52.0 | 3.04e-01 | 100.0% | 15.5% |
| 3470968 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.57 | 48.0 | 3.36e-01 | 96.6% | 55.6% |
| 3839854 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.56 | 49.0 | 3.33e-01 | 94.8% | 32.8% |
| 3998938 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.56 | 49.0 | 2.88e-01 | 100.0% | 25.1% |
| 3272533 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 46.0 | 2.85e-01 | 91.4% | 51.4% |
| 3981752 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.55 | 40.0 | 3.02e-01 | 75.9% | 50.0% |
| 3970120 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.55 | 41.0 | 2.99e-01 | 84.5% | 75.0% |
| 4028041 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.52 | 45.0 | 2.86e-01 | 94.8% | 50.0% |
| 4928641 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.52 | 37.0 | 3.41e-01 | 75.9% | 93.3% |
| 3248192 | 7581.1.1.39 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C, FAE1_CUT1_RppA | 0.51 | 44.0 | 2.65e-01 | 98.3% | 43.5% |
| 4928347 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.51 | 41.0 | 2.87e-01 | 86.2% | 36.5% |
| 3523591 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 37.0 | 3.12e-01 | 77.6% | 83.0% |
| 3853273 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.51 | 29.0 | 3.14e-01 | 79.3% | 66.0% |
| 3334474 | 7581.1.1.25 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA, ACP_syn_III_C | 0.51 | 42.0 | 2.80e-01 | 87.9% | 32.3% |
| 1684639 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.51 | 42.0 | 3.85e-01 | 93.1% | 80.8% |
| 4029108 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.17e-01 | 82.8% | 45.0% |
| 3428945 | 7581.1.1.25 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA, ACP_syn_III_C | 0.51 | 42.0 | 2.83e-01 | 89.7% | 35.7% |