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OR257569.1__WNL50628.1__RPALISO_36__00010

Bact-Vir

OR257569.1__WNL50628.1__RPALISO_36__00010

Identity

Accession:
OR257569 ↗
Kingdom:
phage

Quality

69.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-68
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mg4A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 57.0 5.77e-01 75.0% 78.8%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.75e-01 76.5% 86.4%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 50.0 4.76e-01 70.6% 63.4%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 4.88e-01 72.1% 85.1%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 5.13e-01 75.0% 85.7%
7vw6B01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.69 59.0 6.01e-01 95.6% 94.0%
2ys9A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 50.0 5.03e-01 79.4% 84.3%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.47e-01 89.7% 87.5%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.66 45.0 4.28e-01 70.6% 78.5%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 4.62e-01 76.5% 84.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.66e-01 70.6% 92.1%
3i9v201 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.65 55.0 5.47e-01 94.1% 98.6%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.86e-01 77.9% 79.1%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 3.64e-01 72.1% 43.4%
3d5lB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.03e-01 75.0% 55.9%
5douA01 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.63 49.0 3.68e-01 95.6% 33.9%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.64e-01 77.9% 87.9%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.68e-01 88.2% 74.7%
2pjpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 4.66e-01 77.9% 88.3%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.47e-01 73.5% 41.0%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 3.98e-01 75.0% 64.0%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.40e-01 75.0% 39.0%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.33e-01 75.0% 39.2%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 42.0 4.18e-01 70.6% 68.6%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 50.0 4.07e-01 91.2% 66.7%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 45.0 4.24e-01 86.8% 90.2%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.50e-01 79.4% 51.7%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.76e-01 79.4% 64.9%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 39.0 4.26e-01 73.5% 94.4%
2o2kA01 3.10.196.10 Alpha Beta › Roll › Cobalamin-dependent Methionine Synthase; domain 1 › Vitamin B12-dependent methionine synthase, activation domain 0.54 50.0 3.36e-01 100.0% 95.9%
4dqlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.54 46.0 3.58e-01 98.5% 90.1%
1gq2A01 3.40.50.10380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Malic enzyme, N-terminal domain 0.54 42.0 2.97e-01 91.2% 57.6%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 4.17e-01 95.6% 88.4%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 38.0 2.83e-01 79.4% 26.3%
4g8bA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 43.0 2.97e-01 100.0% 92.4%
3gziA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 39.0 2.89e-01 86.8% 53.2%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3454275 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.86 59.0 6.72e-01 70.6% 98.0%
3582723 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.83 56.0 5.63e-01 70.6% 70.0%
3889817 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.83 56.0 5.32e-01 70.6% 61.3%
3815398 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.83 55.0 4.82e-01 70.6% 47.0%
3484058 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 56.0 5.17e-01 70.6% 57.6%
3359036 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.82 57.0 5.03e-01 72.1% 52.6%
3466087 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.81 55.0 6.29e-01 70.6% 98.0%
3997838 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.81 56.0 5.79e-01 72.1% 76.9%
3507783 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 59.0 6.25e-01 76.5% 90.0%
3796365 101.1.1.421 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain, CUT 0.81 56.0 3.95e-01 72.1% 25.6%
3478184 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.81 56.0 4.88e-01 72.1% 50.0%
3579029 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.81 55.0 5.25e-01 70.6% 69.2%
4968571 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 54.0 6.14e-01 70.6% 96.0%
3693602 3541.1.1.2 beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG29_N 0.80 56.0 5.20e-01 73.5% 58.8%
3660305 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.80 55.0 6.20e-01 72.1% 100.0%
3847051 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.79 55.0 5.07e-01 72.1% 60.0%
3385907 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 55.0 6.06e-01 73.5% 100.0%
3231816 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.78 54.0 5.69e-01 72.1% 83.3%
4404513 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.77 61.0 5.89e-01 83.8% 78.7%
3365751 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.76 54.0 5.53e-01 75.0% 81.5%
4233438 101.1.1.226 alpha arrays › HTH › HTH › Three-helical HTH › UPF0240 0.76 53.0 5.48e-01 77.9% 76.9%
3909103 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 54.0 5.94e-01 75.0% 92.7%
4974616 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 53.0 5.59e-01 75.0% 100.0%
4468523 613.1.1.1 alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c 0.74 59.0 4.27e-01 88.2% 62.6%
162321 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.73 53.0 4.98e-01 76.5% 72.3%
4133158 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.71 52.0 4.66e-01 77.9% 72.6%
3953587 2008.1.1.168 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 0.71 52.0 4.57e-01 77.9% 69.0%
3986645 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 50.0 5.10e-01 75.0% 86.2%
4008778 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 49.0 5.32e-01 73.5% 98.2%
4972338 4154.1.1.22 beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F_TDP 0.70 50.0 3.85e-01 76.5% 38.7%
3340398 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.69 56.0 4.46e-01 89.7% 86.7%
5044734 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.68 53.0 4.40e-01 86.8% 53.6%
4968362 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.67 57.0 5.70e-01 97.1% 90.0%
2605234 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.67 56.0 5.64e-01 95.6% 92.5%
3739440 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.66 58.0 5.65e-01 95.6% 96.0%
5079070 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.66 48.0 4.37e-01 76.5% 71.1%
4069306 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.66 57.0 5.73e-01 95.6% 94.3%
4578986 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 45.0 4.75e-01 70.6% 88.3%
4953237 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 45.0 4.92e-01 72.1% 94.5%
4097443 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.66 44.0 3.30e-01 70.6% 31.8%
3989292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 3.75e-01 75.0% 42.3%
4337360 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.65 57.0 5.38e-01 95.6% 87.5%
3244508 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.65 51.0 5.43e-01 85.3% 98.3%
4662280 101.1.1.51 alpha arrays › HTH › HTH › Three-helical HTH › Slx4 0.65 48.0 4.47e-01 80.9% 97.8%
4037221 101.35.1.19 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2+RecX_HTH1 0.65 44.0 3.90e-01 70.6% 81.0%
4955811 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.64 47.0 4.40e-01 80.9% 64.4%
4854430 2485.1.1.9 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › 2Fe-2S_thioredx 0.64 56.0 4.96e-01 95.6% 77.9%
4645692 101.1.2.372 alpha arrays › HTH › HTH › winged helix domain › HTH_64 0.64 47.0 4.60e-01 79.4% 88.0%
4963411 101.1.2.938 alpha arrays › HTH › HTH › winged helix domain › PF25947 0.64 46.0 4.58e-01 77.9% 87.1%
3999384 101.1.2.306 alpha arrays › HTH › HTH › winged helix domain › NPR2 0.64 46.0 4.41e-01 77.9% 70.0%
4968018 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.64 55.0 5.45e-01 95.6% 97.1%
4038813 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.63 55.0 4.90e-01 95.6% 73.7%
4887591 3697.1.1.1 alpha bundles › NQO2 helical bundle domain › NQO2 helical bundle domain › NQO2 helical bundle domain › 2Fe-2S_thioredx 0.63 54.0 5.12e-01 95.6% 84.0%
2323888 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 43.0 3.77e-01 73.5% 47.7%
3517520 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.62 42.0 4.38e-01 70.6% 85.0%
5053790 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 43.0 3.93e-01 75.0% 66.3%
3966140 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.61 49.0 4.81e-01 91.2% 97.3%
3602903 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.60 41.0 4.16e-01 70.6% 73.8%
4968637 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 41.0 4.16e-01 73.5% 75.7%
3295746 101.1.2.454 alpha arrays › HTH › HTH › winged helix domain › FAM91_N 0.59 42.0 4.14e-01 76.5% 69.3%
3411170 101.1.2.306 alpha arrays › HTH › HTH › winged helix domain › NPR2 0.59 43.0 4.21e-01 80.9% 77.3%
1159102 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.58 41.0 3.59e-01 75.0% 48.6%
3500170 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 3.76e-01 79.4% 67.8%
3393801 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.55 39.0 3.19e-01 80.9% 37.8%
3522041 109.4.1.835 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INT10 0.55 44.0 3.66e-01 94.1% 64.4%
3590003 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.52 41.0 2.90e-01 91.2% 89.6%