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OR257569.1__WNL50738.1__RPALISO_151__00120
Bact-VirOR257569.1__WNL50738.1__RPALISO_151__00120
Identity
- Accession:
- OR257569 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-103
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 48.0 | 3.76e-01 | 94.7% | 33.6% |
| 4dkcB00 | 1.20.1250.80 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 | 0.67 | 45.0 | 3.27e-01 | 70.2% | 52.5% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 47.0 | 3.61e-01 | 78.9% | 82.6% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.64 | 49.0 | 4.06e-01 | 93.0% | 47.5% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 46.0 | 3.26e-01 | 78.9% | 73.3% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.63 | 49.0 | 4.26e-01 | 93.0% | 52.6% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 42.0 | 4.02e-01 | 70.2% | 59.7% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.62 | 51.0 | 4.29e-01 | 91.2% | 82.7% |
| 2yveB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 52.0 | 3.81e-01 | 100.0% | 41.3% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.60 | 50.0 | 4.09e-01 | 96.5% | 69.9% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.60 | 40.0 | 3.48e-01 | 70.2% | 85.6% |
| 3s5rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 50.0 | 3.54e-01 | 98.2% | 58.2% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 48.0 | 4.44e-01 | 93.0% | 82.7% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 41.0 | 3.98e-01 | 75.4% | 78.1% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 42.0 | 3.45e-01 | 78.9% | 78.2% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.58 | 45.0 | 4.09e-01 | 89.5% | 63.3% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.57 | 38.0 | 3.11e-01 | 70.2% | 41.1% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 46.0 | 3.84e-01 | 91.2% | 83.2% |
| 5mmjo00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.56 | 46.0 | 4.27e-01 | 96.5% | 93.3% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.55 | 37.0 | 3.56e-01 | 70.2% | 59.1% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.55 | 38.0 | 3.78e-01 | 73.7% | 75.4% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 47.0 | 3.92e-01 | 96.5% | 97.1% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 39.0 | 3.62e-01 | 75.4% | 60.3% |
| 3phuA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 39.0 | 2.86e-01 | 75.4% | 61.6% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.55 | 45.0 | 3.15e-01 | 94.7% | 39.5% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.54 | 42.0 | 3.32e-01 | 89.5% | 83.2% |
| 3m0fB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 43.0 | 3.55e-01 | 100.0% | 89.4% |
| 2k19A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 42.0 | 3.66e-01 | 96.5% | 58.2% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.51 | 42.0 | 3.48e-01 | 100.0% | 93.3% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.51 | 44.0 | 3.91e-01 | 100.0% | 68.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4266291 | 4003.1.1.1 ↗ | alpha arrays › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › TACO1_YebC_N | 0.66 | 54.0 | 4.94e-01 | 98.2% | 68.8% |
| 4329038 | 375.1.9.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Insulin | 0.66 | 44.0 | 3.83e-01 | 70.2% | 44.4% |
| 4964836 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.65 | 41.0 | 2.91e-01 | 82.5% | 21.8% |
| 3415622 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.64 | 51.0 | 3.39e-01 | 93.0% | 68.1% |
| 3244395 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.62 | 45.0 | 3.37e-01 | 77.2% | 80.0% |
| 4541195 | 3755.3.1.470 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T3SSipB | 0.62 | 42.0 | 3.16e-01 | 70.2% | 73.1% |
| 4995787 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.61 | 51.0 | 4.94e-01 | 93.0% | 87.7% |
| 3238851 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.60 | 43.0 | 3.69e-01 | 93.0% | 43.8% |
| 4962699 | 101.1.2.924 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7342 | 0.60 | 51.0 | 3.67e-01 | 96.5% | 33.3% |
| 5055469 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.58 | 49.0 | 4.07e-01 | 100.0% | 93.6% |
| 4397490 | 164.1.1.15 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › PPPI_inhib | 0.58 | 48.0 | 3.55e-01 | 98.2% | 75.3% |
| 3542203 | 3755.3.1.44 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › JMY | 0.58 | 47.0 | 3.34e-01 | 96.5% | 62.5% |
| 3964046 | 5048.1.1.12 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › SpecificRecomb | 0.57 | 50.0 | 3.18e-01 | 100.0% | 66.9% |
| 4966860 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.57 | 45.0 | 3.50e-01 | 89.5% | 49.2% |
| 5038847 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 40.0 | 3.74e-01 | 75.4% | 65.7% |
| 3997485 | 604.6.1.26 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › PF25999 | 0.56 | 47.0 | 3.86e-01 | 96.5% | 67.3% |
| 3563979 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.56 | 37.0 | 2.88e-01 | 70.2% | 28.3% |
| 3632511 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.55 | 48.0 | 2.83e-01 | 100.0% | 24.0% |
| 3784262 | 616.1.1.29 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › PF28401 | 0.55 | 47.0 | 4.06e-01 | 100.0% | 91.6% |
| 4019450 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.55 | 40.0 | 3.38e-01 | 94.7% | 42.7% |
| 5051969 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.55 | 39.0 | 3.32e-01 | 96.5% | 41.8% |
| 4016322 | 109.4.1.1304 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 | 0.55 | 46.0 | 3.30e-01 | 98.2% | 45.4% |
| 3840064 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.54 | 38.0 | 3.30e-01 | 75.4% | 72.6% |
| 3742470 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.51 | 35.0 | 3.49e-01 | 77.2% | 70.0% |
| 3936972 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.50 | 42.0 | 3.43e-01 | 98.2% | 75.8% |
| 3715689 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.50 | 43.0 | 3.47e-01 | 100.0% | 60.9% |