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OR257569.1__WNL50781.1__RPALISO_194__00163
Bact-VirOR257569.1__WNL50781.1__RPALISO_194__00163
Identity
- Accession:
- OR257569 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.87 | 61.0 | 5.42e-01 | 75.9% | 53.3% |
| 5mmjo00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.84 | 55.0 | 5.70e-01 | 100.0% | 70.7% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.83 | 67.0 | 5.92e-01 | 89.9% | 60.9% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.82 | 52.0 | 5.53e-01 | 100.0% | 72.9% |
| 5lbmA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.82 | 57.0 | 5.69e-01 | 73.4% | 69.9% |
| 2ahmG01 | 6.10.250.2820 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 56.0 | 5.14e-01 | 74.7% | 77.8% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 54.0 | 4.63e-01 | 97.5% | 48.3% |
| 1xdpA01 | 1.20.58.310 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Polyphosphate kinase N-terminal domain | 0.76 | 53.0 | 4.81e-01 | 72.2% | 58.1% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 56.0 | 5.06e-01 | 78.5% | 67.9% |
| 7metA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.76 | 68.0 | 4.53e-01 | 100.0% | 35.9% |
| 4akgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.75 | 62.0 | 4.81e-01 | 88.6% | 73.8% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.75 | 59.0 | 5.70e-01 | 88.6% | 74.4% |
| 5fmnA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.75 | 60.0 | 5.89e-01 | 89.9% | 80.2% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 60.0 | 5.67e-01 | 100.0% | 75.0% |
| 5ffdA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 48.0 | 4.04e-01 | 100.0% | 40.1% |
| 3fcnA00 | 1.20.1220.20 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Uncharcterised protein PF01724 | 0.71 | 63.0 | 5.05e-01 | 100.0% | 86.1% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 54.0 | 4.97e-01 | 100.0% | 63.8% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 49.0 | 4.62e-01 | 100.0% | 60.2% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 63.0 | 5.77e-01 | 100.0% | 78.4% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.69 | 63.0 | 5.22e-01 | 100.0% | 88.1% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.68 | 48.0 | 4.20e-01 | 100.0% | 49.6% |
| 2b7mA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.68 | 62.0 | 3.71e-01 | 100.0% | 16.6% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.64 | 59.0 | 5.04e-01 | 100.0% | 70.8% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 57.0 | 5.15e-01 | 100.0% | 76.6% |
| 2ipcA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.62 | 50.0 | 3.58e-01 | 89.9% | 55.0% |
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.60 | 55.0 | 4.76e-01 | 100.0% | 90.8% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 52.0 | 4.57e-01 | 100.0% | 67.5% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 37.0 | 3.16e-01 | 100.0% | 37.5% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.57 | 50.0 | 4.46e-01 | 100.0% | 84.6% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 45.0 | 4.24e-01 | 100.0% | 70.3% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 44.0 | 4.14e-01 | 100.0% | 68.3% |
| 7ae2A01 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.56 | 51.0 | 4.20e-01 | 100.0% | 91.2% |
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 39.0 | 3.24e-01 | 100.0% | 41.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5067572 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.89 | 62.0 | 5.58e-01 | 72.2% | 55.2% |
| 3229885 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.84 | 59.0 | 5.49e-01 | 91.1% | 59.2% |
| 4977102 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.83 | 61.0 | 5.11e-01 | 100.0% | 48.0% |
| 3714806 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.82 | 57.0 | 3.83e-01 | 72.2% | 21.4% |
| 3462100 | 604.1.1.102 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF8324 | 0.80 | 60.0 | 5.18e-01 | 79.7% | 52.5% |
| 3516461 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.79 | 58.0 | 5.15e-01 | 77.2% | 58.2% |
| 3901573 | 604.12.1.97 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › PMP22_Claudin | 0.78 | 68.0 | 5.99e-01 | 98.7% | 66.4% |
| 3842 | 604.14.1.1 ↗ | alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › PP_kinase_N | 0.77 | 54.0 | 4.92e-01 | 73.4% | 59.0% |
| 3306718 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.77 | 56.0 | 4.05e-01 | 75.9% | 89.8% |
| 3291616 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.75 | 53.0 | 3.80e-01 | 73.4% | 27.1% |
| 3484774 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.74 | 61.0 | 5.50e-01 | 100.0% | 65.7% |
| 3692017 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.74 | 68.0 | 5.54e-01 | 100.0% | 92.1% |
| 3257705 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.73 | 51.0 | 4.81e-01 | 73.4% | 60.0% |
| 3390311 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.73 | 68.0 | 6.00e-01 | 100.0% | 75.5% |
| 4411392 | 192.29.1.164 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › RRP36 | 0.73 | 61.0 | 5.09e-01 | 91.1% | 58.5% |
| 3210369 | 603.1.1.108 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27599 | 0.73 | 50.0 | 4.28e-01 | 100.0% | 43.8% |
| 4976214 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.72 | 63.0 | 4.66e-01 | 96.2% | 76.5% |
| 3950461 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.71 | 58.0 | 5.37e-01 | 89.9% | 70.0% |
| 3599426 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.71 | 60.0 | 4.13e-01 | 94.9% | 28.2% |
| 3600242 | 109.4.1.91 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec10_HB | 0.71 | 63.0 | 3.72e-01 | 100.0% | 26.0% |
| 3223914 | 5001.1.1.84 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz | 0.70 | 63.0 | 4.24e-01 | 100.0% | 73.6% |
| 2833339 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.70 | 55.0 | 5.49e-01 | 89.9% | 83.1% |
| 3718789 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.69 | 63.0 | 4.26e-01 | 100.0% | 28.9% |
| 3831 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.69 | 63.0 | 5.77e-01 | 100.0% | 78.4% |
| 3937657 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.69 | 60.0 | 3.71e-01 | 93.7% | 17.8% |
| 4354686 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.68 | 52.0 | 4.53e-01 | 82.3% | 60.8% |
| 3704359 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 58.0 | 4.44e-01 | 100.0% | 42.3% |
| 3769667 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 59.0 | 5.38e-01 | 100.0% | 72.4% |
| 3909442 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.67 | 58.0 | 3.55e-01 | 93.7% | 15.7% |
| 3482273 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.67 | 60.0 | 5.37e-01 | 100.0% | 76.1% |
| 3782607 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.65 | 58.0 | 4.01e-01 | 100.0% | 70.7% |
| 3944323 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 54.0 | 4.99e-01 | 100.0% | 72.0% |
| 4027360 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.65 | 55.0 | 3.85e-01 | 94.9% | 55.5% |
| 3926967 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.65 | 53.0 | 3.51e-01 | 93.7% | 22.2% |
| 3218345 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.64 | 54.0 | 3.64e-01 | 94.9% | 70.8% |
| 3386010 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.64 | 51.0 | 3.09e-01 | 87.3% | 74.1% |
| 3994797 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.62 | 53.0 | 4.34e-01 | 100.0% | 49.7% |
| 4250108 | 5069.1.3.1 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt | 0.61 | 45.0 | 3.88e-01 | 100.0% | 49.6% |
| 3463721 | 5077.1.1.0 ↗ | extended segments › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein | 0.60 | 46.0 | 4.07e-01 | 88.6% | 55.7% |
| 4318541 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.60 | 46.0 | 4.25e-01 | 84.8% | 66.7% |
| 3255158 | 109.4.1.108 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CTNNBL | 0.60 | 53.0 | 3.30e-01 | 100.0% | 18.3% |
| 4647112 | 109.4.1.464 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exportin-T | 0.58 | 50.0 | 3.48e-01 | 100.0% | 29.6% |
| 3675439 | 5059.1.1.52 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › PAP2 | 0.55 | 41.0 | 3.56e-01 | 98.7% | 49.2% |
| 5026719 | 613.1.1.1 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c | 0.51 | 43.0 | 3.24e-01 | 97.5% | 63.6% |