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OR258281.1__WNA15740.1__XaC1_97__00097

Bact-Vir

OR258281.1__WNA15740.1__XaC1_97__00097

Identity

Accession:
OR258281 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_XaC1

TaxID: 3073039

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-106
PDB
Domain cluster: rep: OQ411014.1__WEM33130.1__EJP02_069__00069__D7-96
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jfdA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.59 36.0 4.34e-01 95.1% 95.5%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 42.0 4.26e-01 83.3% 89.0%
2yvsA02 3.30.70.2560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 28.0 3.53e-01 89.2% 88.1%
4nnzA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 40.0 3.31e-01 85.3% 89.5%
3bv8A00 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.51 30.0 3.27e-01 94.1% 69.4%
5eufA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 39.0 3.12e-01 83.3% 92.3%
3ifrB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 40.0 3.19e-01 91.2% 86.8%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3956597 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 45.0 3.41e-01 84.3% 90.8%
3734422 109.4.1.2516 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IPO5 0.57 41.0 2.45e-01 75.5% 18.5%
4168975 4048.1.1.0 ↗ alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases 0.56 32.0 3.62e-01 83.3% 74.7%
3510664 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.56 37.0 3.33e-01 92.2% 48.6%
3479731 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 40.0 3.37e-01 76.5% 83.8%
3207719 2002.1.1.262 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SGT1 0.53 44.0 3.76e-01 92.2% 95.4%
3249128 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.52 36.0 3.83e-01 71.6% 87.8%
3706084 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 35.0 3.68e-01 70.6% 90.5%
4000154 242.3.1.1 ↗ a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I 0.52 42.0 4.03e-01 90.2% 81.7%
3933800 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 38.0 2.73e-01 78.4% 30.6%
3690288 109.4.1.2628 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TOR1L1_N, TPR_IMB1, TPR_IPO5 0.51 41.0 2.36e-01 86.3% 60.1%
3443644 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.51 39.0 2.76e-01 82.4% 82.4%
3628287 2003.1.9.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.50 39.0 2.74e-01 85.3% 45.6%