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OR258281.1__WNA15910.1__XaC1_267__00267

Bact-Vir

OR258281.1__WNA15910.1__XaC1_267__00267

Identity

Accession:
OR258281 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_XaC1

TaxID: 3073039

Cluster

View cluster (51 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-84
PDB
Domain cluster: rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.92 82.0 8.49e-01 98.8% 100.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.86 48.0 5.61e-01 84.1% 76.7%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.85 49.0 4.48e-01 86.6% 46.1%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 47.0 5.21e-01 85.4% 71.2%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 56.0 6.15e-01 86.6% 89.4%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.80 56.0 6.12e-01 87.8% 88.2%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.80 47.0 5.23e-01 87.8% 74.2%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 44.0 5.48e-01 82.9% 91.8%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.79 55.0 5.85e-01 86.6% 82.2%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 58.0 6.03e-01 89.0% 84.0%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 5.36e-01 93.9% 56.2%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 39.0 4.86e-01 78.0% 89.6%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 52.0 4.79e-01 87.8% 60.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 45.0 4.70e-01 92.7% 71.2%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 4.75e-01 87.8% 61.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 42.0 4.76e-01 84.1% 81.4%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 40.0 4.32e-01 86.6% 66.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 43.0 5.08e-01 93.9% 96.3%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 46.0 4.98e-01 91.5% 83.6%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 40.0 4.70e-01 85.4% 92.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 42.0 4.43e-01 89.0% 70.4%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 38.0 4.68e-01 85.4% 93.8%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 39.0 4.66e-01 86.6% 92.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 36.0 4.46e-01 78.0% 91.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 39.0 4.61e-01 86.6% 90.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 39.0 4.46e-01 84.1% 83.9%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.63 47.0 4.35e-01 100.0% 60.6%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 42.0 4.86e-01 86.6% 100.0%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.62 46.0 4.47e-01 91.5% 69.9%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 46.0 5.01e-01 86.6% 95.6%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.95e-01 100.0% 91.6%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 42.0 4.78e-01 86.6% 100.0%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 5.04e-01 100.0% 91.7%
5uctB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.59 51.0 4.87e-01 100.0% 92.0%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.58 44.0 4.33e-01 80.5% 98.9%
4ifdI02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 43.0 3.65e-01 80.5% 79.2%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 4.22e-01 92.7% 88.7%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 34.0 4.08e-01 85.4% 92.3%
7d8gA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.57 44.0 3.52e-01 84.1% 54.5%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.55e-01 100.0% 81.1%
2xgjA05 2.40.30.300 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 47.0 4.14e-01 100.0% 87.7%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.70e-01 86.6% 69.9%
3e8lC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 39.0 3.14e-01 79.3% 93.2%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 39.0 3.51e-01 100.0% 52.8%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.53 44.0 3.25e-01 90.2% 48.6%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.51 37.0 3.75e-01 86.6% 75.9%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 41.0 2.88e-01 91.5% 87.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 38.0 3.70e-01 97.6% 70.8%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4813032 4.1.1.328 ↗ beta barrels › SH3 › SH3 › SH3 › Sm_like 0.93 82.0 8.36e-01 100.0% 96.2%
3473732 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 57.0 6.30e-01 87.8% 86.2%
2167708 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 54.0 6.01e-01 87.8% 84.6%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.78 49.0 5.43e-01 92.7% 80.0%
3783301 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 53.0 4.87e-01 87.8% 55.2%
5038431 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 52.0 5.57e-01 84.1% 81.4%
3389169 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 50.0 4.97e-01 100.0% 65.9%
5081091 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 62.0 5.93e-01 89.0% 87.4%
3907619 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 49.0 4.93e-01 100.0% 65.9%
5060199 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.57e-01 89.0% 87.6%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 51.0 5.19e-01 96.3% 75.0%
4024727 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 4.99e-01 87.8% 62.5%
3832288 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.72 59.0 5.71e-01 87.8% 82.2%
3407089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 48.0 4.90e-01 100.0% 71.2%
171891 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.71 43.0 5.06e-01 87.8% 90.9%
4340758 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 50.0 5.37e-01 84.1% 85.7%
3420348 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.70 40.0 4.68e-01 86.6% 83.6%
4078120 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.69 43.0 4.95e-01 84.1% 92.7%
3550644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 42.0 4.93e-01 90.2% 92.7%
5069300 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 56.0 5.17e-01 87.8% 87.6%
4228570 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 52.0 5.33e-01 87.8% 82.5%
3781710 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.68 42.0 4.32e-01 84.1% 63.7%
5032402 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.45e-01 87.8% 83.5%
3620094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 42.0 4.90e-01 93.9% 92.7%
4191690 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.68 37.0 4.29e-01 82.9% 74.1%
4073433 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 51.0 5.22e-01 92.7% 81.2%
4874733 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 43.0 4.98e-01 93.9% 96.3%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 41.0 4.77e-01 93.9% 90.9%
3903213 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 42.0 3.28e-01 92.7% 29.1%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 39.0 3.87e-01 85.4% 54.1%
3922426 4.1.1.363 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.67 42.0 3.69e-01 89.0% 42.5%
3622846 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 39.0 4.72e-01 87.8% 96.0%
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.66 40.0 4.43e-01 89.0% 75.4%
4418620 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 41.0 2.32e-01 92.7% 5.0%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 39.0 4.57e-01 89.0% 87.3%
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 40.0 4.70e-01 93.9% 90.9%
5003274 4.1.1.222 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6948 0.66 59.0 5.76e-01 100.0% 98.9%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 40.0 4.55e-01 87.8% 83.3%
3965254 4.1.1.222 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6948 0.66 59.0 5.62e-01 100.0% 92.6%
3775592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 41.0 2.21e-01 92.7% 3.3%
1145920 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 39.0 3.97e-01 89.0% 59.0%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 41.0 4.56e-01 85.4% 81.5%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 37.0 4.41e-01 85.4% 90.0%
3709029 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 42.0 4.70e-01 93.9% 90.0%
3820621 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.65 54.0 5.46e-01 87.8% 90.0%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 40.0 4.52e-01 92.7% 85.0%
3404643 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 40.0 4.25e-01 82.9% 71.4%
3941004 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 44.0 4.47e-01 90.2% 71.2%
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 37.0 4.27e-01 84.1% 81.8%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 39.0 4.50e-01 87.8% 89.1%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 39.0 4.12e-01 90.2% 66.7%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.64 36.0 4.37e-01 85.4% 90.0%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 38.0 4.46e-01 91.5% 89.1%
None — 0.64 40.0 2.32e-01 92.7% 6.0%
3574613 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 40.0 3.76e-01 90.2% 52.0%
None — 0.63 40.0 2.32e-01 90.2% 6.6%
3428486 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 39.0 4.02e-01 91.5% 63.7%
3938589 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.63 37.0 4.44e-01 82.9% 96.0%
3220929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.33e-01 86.6% 74.7%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 37.0 4.30e-01 84.1% 89.1%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 42.0 4.56e-01 92.7% 89.2%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.61 38.0 3.78e-01 90.2% 58.8%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.56e-01 86.6% 77.6%
4890270 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.61 35.0 4.07e-01 85.4% 85.2%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 41.0 4.53e-01 86.6% 90.8%
4680746 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.60 40.0 4.15e-01 81.7% 74.7%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 44.0 4.52e-01 97.6% 81.2%
4654204 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.60 41.0 4.05e-01 84.1% 66.3%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 41.0 3.46e-01 96.3% 44.4%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 40.0 4.37e-01 87.8% 90.8%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 3.64e-01 100.0% 34.7%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.68e-01 97.6% 84.7%
3992026 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.58 37.0 4.09e-01 95.1% 83.1%
4078260 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.58 42.0 4.13e-01 90.2% 71.1%
3685533 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.57 48.0 3.63e-01 95.1% 92.6%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.57 39.0 4.06e-01 79.3% 77.3%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.39e-01 82.9% 100.0%
3642001 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 42.0 4.47e-01 89.0% 94.3%
3395585 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.57 38.0 4.22e-01 97.6% 89.2%
3492982 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.55 48.0 4.06e-01 100.0% 57.8%
3363360 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.54 39.0 3.86e-01 100.0% 72.9%
3422852 4.1.1.85 ↗ beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.53 46.0 4.04e-01 97.6% 96.0%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 45.0 4.30e-01 97.6% 81.1%
3828823 3324.1.1.2 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases 0.53 46.0 3.27e-01 100.0% 43.0%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 3.28e-01 100.0% 35.8%
3365658 3324.1.1.1 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › MTR4_beta-barrel 0.52 45.0 3.28e-01 98.8% 50.6%
3277840 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.52 43.0 3.33e-01 96.3% 95.1%
3251414 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.09e-01 98.8% 72.7%
4105189 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.51 37.0 3.53e-01 75.6% 74.7%
3278337 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.51 42.0 3.28e-01 95.1% 98.5%