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OR258281.1__WNA15944.1__XaC1_301__00301

Bact-Vir

OR258281.1__WNA15944.1__XaC1_301__00301

Identity

Accession:
OR258281 ↗
Kingdom:
phage

Quality

46.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_XaC1

TaxID: 3073039

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 467-546
PDB
D2 medium residues 1-99
PDB
D3 medium residues 100-256
PDB
D4 medium residues 615-681
PDB
D5 medium residues 747-816
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1goiB03 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.70 45.0 5.11e-01 87.1% 90.2%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.69 44.0 4.48e-01 72.9% 66.7%
3k3sH01 2.30.130.110 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › 0.55 42.0 4.00e-01 81.4% 92.7%
4k08A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 41.0 3.27e-01 85.7% 39.6%
4k4kA01 2.60.40.2620 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like 0.54 37.0 3.02e-01 75.7% 39.4%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 37.0 2.92e-01 74.3% 61.7%
3vskA03 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 37.0 2.46e-01 77.1% 70.4%
5ir2A00 3.50.30.40 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Ribonuclease E inhibitor RraA/RraA-like 0.52 41.0 2.93e-01 88.6% 59.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3995092 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.64 43.0 3.11e-01 70.0% 40.0%
3907176 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.62 49.0 4.49e-01 85.7% 73.3%
3485667 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.59 40.0 3.93e-01 70.0% 77.3%
3893368 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.58 41.0 4.21e-01 82.9% 78.5%
3572393 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.58 42.0 4.26e-01 82.9% 77.1%
4041054 304.135.1.1 ↗ a+b two layers › Alpha-beta plaits › O-phosphoseryl-tRNA synthetase C-terminal domain › O-phosphoseryl-tRNA synthetase C-terminal domain › SepRS_C 0.57 42.0 3.12e-01 80.0% 85.8%
3902139 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.55 40.0 4.00e-01 82.9% 77.1%
3217307 1.1.9.34 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 0.54 43.0 4.03e-01 90.0% 97.8%
3734748 236.1.1.2 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.51 38.0 2.89e-01 85.7% 54.3%