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OR258281.1__WNA16070.1__XaC1_427__00427

Bact-Vir

OR258281.1__WNA16070.1__XaC1_427__00427

Identity

Accession:
OR258281 ↗
Kingdom:
phage

Quality

53.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 18-137
PDB
D2 medium residues 146-213
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.74 51.0 3.32e-01 72.1% 22.4%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.71 48.0 3.15e-01 70.6% 20.3%
2a22B00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.69 48.0 3.37e-01 72.1% 91.6%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.69 48.0 3.14e-01 72.1% 21.9%
4kh9B02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.67 46.0 3.90e-01 72.1% 86.7%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.66 48.0 3.01e-01 76.5% 22.6%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 50.0 3.80e-01 83.8% 76.2%
4jzjC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 41.0 4.11e-01 100.0% 62.9%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.65 49.0 4.26e-01 80.9% 71.6%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 47.0 3.54e-01 77.9% 77.4%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 57.0 4.88e-01 100.0% 82.6%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 41.0 4.25e-01 80.9% 72.6%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 45.0 3.15e-01 76.5% 28.8%
1n2bB02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.62 43.0 3.73e-01 72.1% 66.3%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.62 46.0 3.57e-01 77.9% 79.7%
1l0qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 42.0 3.81e-01 70.6% 81.1%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.61 45.0 3.76e-01 80.9% 82.2%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.61 46.0 4.23e-01 79.4% 67.4%
3tp4B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 46.0 4.13e-01 100.0% 59.1%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 4.04e-01 94.1% 77.6%
1o97D01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 49.0 3.57e-01 89.7% 34.4%
1ko2A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.60 43.0 3.00e-01 76.5% 27.8%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 48.0 3.68e-01 91.2% 96.4%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 43.0 3.69e-01 77.9% 82.1%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 47.0 3.26e-01 91.2% 39.3%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 3.98e-01 94.1% 60.0%
4kc3B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 3.60e-01 70.6% 87.4%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 3.81e-01 94.1% 72.5%
7odhL01 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.58 41.0 2.47e-01 75.0% 77.9%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 3.80e-01 94.1% 75.2%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 51.0 4.27e-01 100.0% 59.0%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 50.0 4.14e-01 100.0% 55.5%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.24e-01 95.6% 72.2%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 45.0 2.81e-01 86.8% 85.6%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.68e-01 91.2% 79.6%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 46.0 4.68e-01 95.6% 92.4%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 47.0 3.76e-01 100.0% 47.4%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.55 43.0 3.88e-01 95.6% 60.8%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 43.0 2.98e-01 85.3% 76.2%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.55 44.0 3.88e-01 91.2% 92.5%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 4.01e-01 100.0% 76.7%
3lidA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 38.0 3.49e-01 76.5% 96.9%
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.54 37.0 2.99e-01 73.5% 90.7%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 38.0 2.91e-01 75.0% 79.4%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 44.0 3.55e-01 94.1% 69.7%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 44.0 3.33e-01 92.6% 65.7%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 44.0 2.91e-01 94.1% 94.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 39.0 3.98e-01 79.4% 93.9%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.51 37.0 2.92e-01 76.5% 78.7%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.51 43.0 3.79e-01 97.1% 87.5%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.50 40.0 3.25e-01 89.7% 79.3%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.50 42.0 3.85e-01 95.6% 92.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4250402 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 54.0 6.48e-01 72.1% 100.0%
3359021 5.1.5.86 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 0.70 52.0 3.29e-01 77.9% 28.6%
3935357 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 55.0 4.61e-01 86.8% 79.2%
3352484 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.70 52.0 3.19e-01 77.9% 25.3%
4982290 11.1.1.15 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD 0.70 44.0 4.27e-01 100.0% 58.7%
5027014 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.70 51.0 3.69e-01 77.9% 96.8%
3248060 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.68 55.0 4.69e-01 88.2% 90.0%
5018457 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 47.0 4.65e-01 100.0% 70.0%
3222677 209.1.1.0 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.67 47.0 3.29e-01 75.0% 23.8%
4955051 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 46.0 4.04e-01 72.1% 73.0%
3955541 2003.1.2.155 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_7 0.66 52.0 4.17e-01 85.3% 97.8%
3896484 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.66 53.0 4.40e-01 88.2% 80.0%
3513352 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.65 48.0 4.04e-01 79.4% 71.3%
3509056 221.13.1.0 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.64 47.0 3.79e-01 76.5% 85.6%
3192949 2003.1.2.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.64 56.0 3.67e-01 100.0% 69.5%
3881671 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.64 46.0 3.77e-01 75.0% 92.5%
3888254 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 41.0 4.70e-01 73.5% 97.8%
5024203 330.10.1.0 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.64 46.0 4.16e-01 75.0% 74.4%
3553623 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.63 44.0 3.60e-01 73.5% 86.4%
4336488 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 44.0 4.40e-01 75.0% 78.6%
4961746 304.8.1.122 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DmsR_N 0.61 52.0 4.44e-01 95.6% 83.5%
3173378 109.4.1.338 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 0.61 40.0 2.78e-01 77.9% 18.8%
3322492 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.61 50.0 3.26e-01 89.7% 63.3%
4095892 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.61 43.0 3.38e-01 73.5% 45.7%
3821287 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 49.0 3.92e-01 89.7% 46.4%
4040973 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.61 46.0 4.58e-01 80.9% 78.6%
4403166 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 49.0 5.00e-01 89.7% 96.9%
2831853 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.60 49.0 3.82e-01 92.6% 42.8%
4646686 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.60 44.0 4.40e-01 77.9% 78.6%
3863714 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.60 51.0 3.46e-01 92.6% 56.7%
4932472 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 50.0 4.55e-01 95.6% 81.1%
3269786 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.59 41.0 3.70e-01 72.1% 83.2%
3721942 4086.1.1.1 a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI 0.59 42.0 3.55e-01 73.5% 59.0%
4359254 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.59 44.0 4.33e-01 80.9% 73.3%
3926611 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.59 51.0 3.31e-01 97.1% 93.7%
1793524 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.59 47.0 4.19e-01 92.6% 61.6%
3628210 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 51.0 4.74e-01 97.1% 91.8%
5011583 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.58 46.0 3.37e-01 86.8% 64.2%
4498611 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.58 47.0 3.37e-01 86.8% 62.6%
4157358 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.58 44.0 4.23e-01 82.4% 70.5%
3175033 4086.1.1.1 a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI 0.58 41.0 3.71e-01 73.5% 78.9%
3483806 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.58 43.0 3.35e-01 79.4% 93.3%
4024274 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.58 46.0 4.06e-01 89.7% 59.0%
4887870 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.58 49.0 3.70e-01 94.1% 67.3%
4581676 11.1.4.68 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TcaA_3rd_4th 0.58 41.0 4.04e-01 76.5% 89.3%
4668960 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 3.83e-01 85.3% 75.5%
5010197 11.1.1.1438 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28525 0.57 39.0 3.58e-01 73.5% 81.1%
3292852 4086.1.1.1 a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI 0.57 41.0 3.60e-01 75.0% 68.4%
3221976 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 47.0 2.97e-01 95.6% 72.7%
5083405 5.1.2.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 0.56 48.0 2.96e-01 95.6% 70.5%
4363149 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 48.0 2.69e-01 100.0% 9.7%
4957034 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 47.0 2.97e-01 95.6% 89.3%
3867539 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.55 46.0 3.20e-01 92.6% 59.1%
3184235 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.55 43.0 3.50e-01 89.7% 43.4%
3915600 109.4.1.109 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.55 45.0 2.55e-01 94.1% 11.9%
4583096 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.54 46.0 3.16e-01 100.0% 27.5%
857 9.3.1.1 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Qn_am_d_aII 0.54 43.0 3.76e-01 89.7% 89.8%
3587744 9.9.1.1 beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.54 47.0 3.73e-01 98.5% 78.6%
4941649 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.76e-01 86.8% 88.4%
1281147 9.23.1.1 beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_3 0.52 45.0 4.05e-01 95.6% 92.6%
3507995 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.52 38.0 2.67e-01 77.9% 42.3%