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OR260089.1__WNV48055.1__GB2A_gp023__00023

Bact-Vir

OR260089.1__WNV48055.1__GB2A_gp023__00023

Identity

Accession:
OR260089 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Caulobacter_phage_GB2A

TaxID: 3075107

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-54
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.77 65.0 6.48e-01 96.2% 100.0%
6jrpA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.73 62.0 5.96e-01 100.0% 90.2%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 46.0 4.11e-01 82.7% 48.7%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 44.0 3.53e-01 98.1% 35.7%
2g7rA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.63 56.0 4.75e-01 100.0% 72.1%
1pv0A01 1.10.287.1100 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Sporulation inhibitor A 0.63 38.0 4.51e-01 88.5% 94.1%
1uyvB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.60 44.0 2.84e-01 84.6% 17.9%
3w3uA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 49.0 2.64e-01 92.3% 5.1%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.53 45.0 2.96e-01 100.0% 38.1%
3dbgA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 43.0 2.63e-01 100.0% 24.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4334570 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.80 72.0 6.52e-01 100.0% 74.3%
4322551 604.23.1.0 ↗ alpha bundles › Spectrin repeat-like › Sbi complement-binding domain › Sbi complement-binding domain 0.76 44.0 4.32e-01 100.0% 54.5%
4167208 604.15.1.0 ↗ alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like 0.75 43.0 4.13e-01 100.0% 50.0%
3598252 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.75 64.0 6.56e-01 100.0% 100.0%
4960529 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.74 55.0 5.44e-01 100.0% 74.5%
3410150 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.71 60.0 5.94e-01 98.1% 94.5%
3842951 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.66 51.0 4.09e-01 100.0% 44.0%
4875131 109.4.1.158 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C 0.63 42.0 3.69e-01 90.4% 45.1%
3838463 604.17.1.0 ↗ alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like 0.59 38.0 3.88e-01 94.2% 68.0%
3202736 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.56 37.0 3.78e-01 71.2% 70.0%
5049339 4004.1.1.1 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › YegS_C 0.53 41.0 2.94e-01 94.2% 55.9%
3744750 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.53 43.0 2.83e-01 100.0% 40.4%