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OR260089.1__WNV48063.1__GB2A_gp031__00031
Bact-VirOR260089.1__WNV48063.1__GB2A_gp031__00031
Identity
- Accession:
- OR260089 ↗
- Kingdom:
- phage
Quality
60.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-52
D2
high
residues 71-132
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kzxA02 | 1.10.150.730 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.75 | 58.0 | 5.86e-01 | 87.1% | 85.5% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.73 | 38.0 | 3.25e-01 | 85.5% | 31.3% |
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.67 | 56.0 | 4.62e-01 | 100.0% | 77.2% |
| 3cexA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.67 | 57.0 | 4.26e-01 | 100.0% | 85.9% |
| 4f92B10 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.63 | 48.0 | 3.75e-01 | 85.5% | 36.4% |
| 4fzxC00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 50.0 | 3.77e-01 | 93.5% | 99.4% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.61 | 44.0 | 4.43e-01 | 75.8% | 93.5% |
| 1khcA02 | 1.10.720.50 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › PWWP, helical domain | 0.59 | 48.0 | 4.73e-01 | 93.5% | 94.2% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.59 | 48.0 | 3.67e-01 | 95.2% | 92.1% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.59 | 45.0 | 3.50e-01 | 82.3% | 86.6% |
| 7fsfA02 | 3.30.56.80 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.58 | 48.0 | 4.65e-01 | 95.2% | 84.1% |
| 4p72A04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.57 | 49.0 | 4.62e-01 | 96.8% | 81.6% |
| 3i5gC02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 41.0 | 4.00e-01 | 80.6% | 98.6% |
| 2ex3B02 | 1.20.1270.230 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › DNA terminal protein Gp3, priming domain | 0.56 | 41.0 | 3.81e-01 | 100.0% | 60.5% |
| 6ig5A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.56 | 42.0 | 3.43e-01 | 87.1% | 65.9% |
| 2imsA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.54 | 45.0 | 3.50e-01 | 100.0% | 95.7% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 39.0 | 3.71e-01 | 82.3% | 87.3% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 44.0 | 3.57e-01 | 100.0% | 74.6% |
| 2kdoA02 | 1.10.10.900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › SBDS protein C-terminal domain, subdomain 1 | 0.53 | 37.0 | 3.61e-01 | 100.0% | 65.8% |
| 1dv5A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 38.0 | 3.63e-01 | 82.3% | 97.5% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.52 | 36.0 | 3.25e-01 | 72.6% | 54.2% |
| 1vomA01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 38.0 | 2.47e-01 | 83.9% | 86.5% |
| 1ukcB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.51e-01 | 100.0% | 42.5% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 43.0 | 3.70e-01 | 100.0% | 73.6% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3925923 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.81 | 70.0 | 6.72e-01 | 100.0% | 84.3% |
| 3794285 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.80 | 68.0 | 6.40e-01 | 100.0% | 77.3% |
| 3244328 | 3340.1.1.0 ↗ | extended segments › Helical region in REST corepressor 1 › Helical region in REST corepressor 1 › Helical region in REST corepressor 1 | 0.80 | 54.0 | 5.47e-01 | 93.5% | 71.7% |
| 3893471 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.77 | 63.0 | 6.45e-01 | 98.4% | 93.3% |
| 3926720 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.76 | 66.0 | 6.51e-01 | 100.0% | 92.3% |
| 3368018 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.75 | 66.0 | 6.35e-01 | 100.0% | 87.1% |
| 3925195 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.75 | 64.0 | 6.38e-01 | 100.0% | 92.3% |
| 137564 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.72 | 61.0 | 4.23e-01 | 96.8% | 28.9% |
| 3803972 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.71 | 54.0 | 5.23e-01 | 82.3% | 75.7% |
| 3716420 | 130.1.1.6 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › PRP4 | 0.69 | 51.0 | 5.31e-01 | 98.4% | 90.9% |
| 4318870 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.68 | 60.0 | 3.68e-01 | 100.0% | 29.1% |
| 3734131 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.68 | 59.0 | 5.89e-01 | 100.0% | 96.9% |
| 3977563 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.68 | 48.0 | 3.78e-01 | 75.8% | 35.4% |
| 3269634 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.68 | 51.0 | 5.17e-01 | 80.6% | 83.3% |
| 3527369 | 110.1.1.3 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › DED | 0.67 | 58.0 | 5.20e-01 | 100.0% | 71.1% |
| 3631135 | 130.1.1.16 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1 | 0.66 | 56.0 | 5.48e-01 | 100.0% | 92.9% |
| 3272274 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.63 | 53.0 | 3.86e-01 | 100.0% | 37.4% |
| 3299054 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 46.0 | 2.89e-01 | 83.9% | 43.7% |
| 3438234 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.59 | 42.0 | 4.19e-01 | 75.8% | 98.5% |
| 1866795 | 2484.1.1.91 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like | 0.58 | 48.0 | 3.41e-01 | 100.0% | 88.2% |
| 3502270 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.57 | 46.0 | 3.44e-01 | 93.5% | 96.5% |
| 3728803 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.54 | 40.0 | 3.13e-01 | 82.3% | 82.5% |
| 4969772 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.52 | 40.0 | 3.13e-01 | 85.5% | 80.7% |
| 3314406 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.51 | 45.0 | 3.62e-01 | 100.0% | 70.4% |
| 5014015 | 2006.1.3.9 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › OLD-like_TOPRIM | 0.51 | 44.0 | 3.19e-01 | 100.0% | 74.3% |
| 3964038 | 192.1.1.2 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › GreA_GreB_N | 0.51 | 31.0 | 2.88e-01 | 82.3% | 50.7% |
D3
high
residues 164-208
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.70 | 59.0 | 5.86e-01 | 95.6% | 95.8% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 54.0 | 4.13e-01 | 86.7% | 43.5% |
| 1e91A00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.68 | 54.0 | 4.56e-01 | 97.8% | 50.6% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 57.0 | 5.39e-01 | 95.6% | 98.1% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 58.0 | 4.41e-01 | 95.6% | 45.5% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 44.0 | 2.70e-01 | 80.0% | 11.4% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.66 | 57.0 | 4.59e-01 | 100.0% | 57.1% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 55.0 | 4.11e-01 | 95.6% | 38.3% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 54.0 | 4.12e-01 | 95.6% | 55.9% |
| 3f0cA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 46.0 | 4.51e-01 | 91.1% | 69.4% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 55.0 | 5.14e-01 | 100.0% | 78.9% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.64 | 48.0 | 3.46e-01 | 100.0% | 26.5% |
| 2lqlA02 | 1.10.287.2900 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 49.0 | 4.96e-01 | 91.1% | 90.9% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 52.0 | 3.98e-01 | 100.0% | 37.5% |
| 1bccH00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.62 | 46.0 | 4.17e-01 | 100.0% | 56.1% |
| 1h6vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 50.0 | 3.29e-01 | 100.0% | 19.8% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 49.0 | 3.62e-01 | 97.8% | 31.9% |
| 2gbbB00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.61 | 49.0 | 3.50e-01 | 97.8% | 66.5% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 50.0 | 3.47e-01 | 97.8% | 31.7% |
| 3rmgA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 51.0 | 3.11e-01 | 100.0% | 14.7% |
| 2ibdA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 48.0 | 4.84e-01 | 86.7% | 100.0% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 51.0 | 4.53e-01 | 100.0% | 71.6% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.59 | 44.0 | 4.01e-01 | 93.3% | 58.2% |
| 5kp7B00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.58 | 51.0 | 4.25e-01 | 100.0% | 96.2% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 48.0 | 4.77e-01 | 91.1% | 93.8% |
| 3cswC01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.57 | 44.0 | 3.59e-01 | 100.0% | 41.5% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 49.0 | 3.21e-01 | 97.8% | 88.2% |
| 6lo8F01 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.57 | 46.0 | 4.17e-01 | 100.0% | 65.2% |
| 1fkmA02 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.56 | 49.0 | 3.54e-01 | 100.0% | 34.4% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.56 | 48.0 | 3.11e-01 | 100.0% | 24.4% |
| 1hwyA01 | 1.10.287.140 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 44.0 | 4.32e-01 | 97.8% | 86.3% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.54 | 44.0 | 4.09e-01 | 100.0% | 69.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4281883 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.77 | 66.0 | 4.71e-01 | 100.0% | 34.1% |
| 5058508 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.74 | 62.0 | 3.58e-01 | 100.0% | 10.4% |
| 4951651 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.72 | 61.0 | 5.45e-01 | 100.0% | 73.5% |
| 3314379 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.72 | 63.0 | 5.46e-01 | 100.0% | 64.3% |
| 3349006 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.71 | 59.0 | 3.84e-01 | 97.8% | 21.9% |
| 3839204 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.71 | 58.0 | 3.87e-01 | 100.0% | 23.3% |
| 4946898 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.69 | 58.0 | 4.97e-01 | 95.6% | 64.0% |
| 1878710 | 4970.1.1.1 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_B | 0.69 | 60.0 | 5.55e-01 | 95.6% | 91.1% |
| 3234298 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.69 | 53.0 | 5.03e-01 | 86.7% | 80.0% |
| 3681927 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.69 | 58.0 | 3.71e-01 | 95.6% | 21.3% |
| 4132296 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.69 | 56.0 | 5.10e-01 | 95.6% | 68.3% |
| 3880178 | 192.8.1.92 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CUPID | 0.68 | 54.0 | 4.42e-01 | 93.3% | 48.8% |
| 3798353 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.68 | 61.0 | 4.16e-01 | 100.0% | 94.7% |
| 3888542 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.67 | 56.0 | 3.71e-01 | 100.0% | 21.5% |
| 4647093 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 57.0 | 4.06e-01 | 95.6% | 34.8% |
| 3513364 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.67 | 57.0 | 3.95e-01 | 95.6% | 33.3% |
| 3340508 | 3882.1.1.1 ↗ | alpha bundles › Atg17 › Atg17 › Atg17 › ATG17_like | 0.67 | 56.0 | 3.24e-01 | 93.3% | 10.6% |
| 3613157 | 632.19.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › PF27508 | 0.66 | 53.0 | 4.47e-01 | 95.6% | 51.8% |
| 3399808 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.66 | 56.0 | 3.81e-01 | 93.3% | 36.8% |
| 3978383 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.66 | 58.0 | 3.84e-01 | 100.0% | 43.2% |
| 3235794 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.65 | 57.0 | 4.03e-01 | 100.0% | 82.9% |
| 3474500 | 632.7.1.25 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › PF27508 | 0.65 | 54.0 | 4.43e-01 | 95.6% | 51.8% |
| 4974472 | 7515.1.1.0 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like | 0.64 | 52.0 | 3.04e-01 | 100.0% | 9.8% |
| 4118017 | 4336.2.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 | 0.64 | 56.0 | 4.36e-01 | 100.0% | 51.0% |
| 3720763 | 5086.1.1.169 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › NCA2 | 0.64 | 54.0 | 3.70e-01 | 100.0% | 45.9% |
| 3218345 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.64 | 55.0 | 3.33e-01 | 100.0% | 14.8% |
| 3240629 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.64 | 55.0 | 3.30e-01 | 100.0% | 83.7% |
| 3621595 | 4336.2.1.3 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › COMPASS-Shg1 | 0.64 | 54.0 | 4.48e-01 | 95.6% | 58.7% |
| 1675309 | 601.51.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N | 0.63 | 53.0 | 4.11e-01 | 95.6% | 45.0% |
| 3702509 | 632.1.1.11 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › HYOU1_C | 0.63 | 50.0 | 4.21e-01 | 95.6% | 51.8% |
| 3681312 | 633.7.1.0 ↗ | alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like | 0.62 | 54.0 | 3.69e-01 | 100.0% | 66.7% |
| 3611824 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.61 | 48.0 | 4.27e-01 | 97.8% | 60.0% |
| 3414086 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 52.0 | 4.19e-01 | 100.0% | 50.0% |
| 4973175 | 159.1.2.33 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › dUTPase_2 | 0.61 | 52.0 | 3.94e-01 | 100.0% | 53.9% |
| 3798291 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.60 | 48.0 | 3.87e-01 | 88.9% | 47.8% |
| 3518443 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.59 | 42.0 | 3.42e-01 | 80.0% | 37.9% |
| 3279822 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.59 | 49.0 | 3.66e-01 | 97.8% | 39.2% |
| 4295807 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.58 | 50.0 | 3.84e-01 | 100.0% | 53.3% |
| 5010063 | 604.24.1.1 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C | 0.58 | 47.0 | 3.77e-01 | 97.8% | 47.0% |
| 4962910 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.58 | 50.0 | 3.61e-01 | 100.0% | 78.5% |
| 2875811 | 4983.1.1.1 ↗ | alpha superhelices › Indoleamine 2,3-dioxygenase N-terminal subdomain › Indoleamine 2,3-dioxygenase N-terminal subdomain › Indoleamine 2,3-dioxygenase N-terminal subdomain › IDO | 0.57 | 47.0 | 3.51e-01 | 93.3% | 37.0% |
D4
medium
residues 221-280