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OR260089.1__WNV48097.1__GB2A_gp065c__00065

Bact-Vir

OR260089.1__WNV48097.1__GB2A_gp065c__00065

Identity

Accession:
OR260089 ↗
Kingdom:
phage

Quality

45.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Caulobacter_phage_GB2A

TaxID: 3075107

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-115
PDB
D2 high residues 526-574
PDB
Domain cluster: rep: IMGVR_UViG_3300025164_000029-3300025164-Ga0209521_100019362__D460-506
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7odhL01 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.71 52.0 2.94e-01 77.6% 15.9%
4as2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.67 46.0 3.01e-01 87.8% 16.1%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 50.0 3.39e-01 83.7% 21.9%
4m6rA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.66 50.0 3.25e-01 83.7% 81.7%
8esvA01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.62 57.0 3.61e-01 100.0% 89.9%
4jcsA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.53 39.0 3.61e-01 77.6% 67.7%
4mi2A02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.52 42.0 4.05e-01 98.0% 82.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987729 2003.1.2.17 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.82 62.0 3.54e-01 83.7% 8.4%
3684418 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.68 55.0 3.68e-01 89.8% 38.5%
3581139 131.1.1.1 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I 0.65 51.0 3.40e-01 85.7% 28.0%
3606062 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 50.0 3.71e-01 93.9% 33.8%
3719269 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 50.0 4.14e-01 93.9% 52.2%