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OR260090.1__WNV48144.1__Ql52_gp008__00008

Bact-Vir

OR260090.1__WNV48144.1__Ql52_gp008__00008

Identity

Accession:
OR260090 ↗
Kingdom:
phage

Quality

72.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autonotataviridae› Lullwatervirus› Caulobacter_phage_Quill_5.2

TaxID: 3075108

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-69
PDB
D2 medium residues 70-127
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.67 49.0 4.29e-01 77.6% 97.7%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.67 42.0 3.72e-01 91.4% 43.4%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.65 45.0 4.55e-01 82.8% 73.7%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.64 48.0 4.21e-01 79.3% 94.0%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 43.0 4.14e-01 82.8% 61.2%
2uv8A07 6.10.140.1410 Special › Helix non-globular › Helix Hairpins › 0.63 45.0 3.95e-01 91.4% 50.6%
3sk9A00 1.10.3210.30 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.63 48.0 3.26e-01 84.5% 41.7%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.63 50.0 4.61e-01 89.7% 98.7%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.62 42.0 4.45e-01 91.4% 78.8%
2ah5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 49.0 4.79e-01 91.4% 96.9%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 45.0 3.70e-01 81.0% 65.0%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 39.0 3.35e-01 75.9% 58.4%
2x6hA01 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.56 40.0 2.78e-01 75.9% 32.8%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 44.0 4.20e-01 87.9% 76.5%
2g80A02 1.10.720.60 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.54 43.0 4.07e-01 100.0% 98.7%
2lefA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.54 43.0 3.82e-01 89.7% 79.1%
1xgsA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.95e-01 89.7% 75.3%
3pvlA01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.53 45.0 3.15e-01 98.3% 89.9%
2vkzA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 41.0 2.65e-01 82.8% 19.1%
2yi9A05 1.20.1270.270 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain 0.52 46.0 4.19e-01 100.0% 81.8%
3dfzA02 1.10.8.610 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › SirC, precorrin-2 dehydrogenase, C-terminal helical domain-like 0.51 41.0 3.77e-01 87.9% 75.7%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.44e-01 82.8% 64.3%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3708851 4030.1.1.0 ↗ alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz 0.79 48.0 4.63e-01 77.6% 55.4%
3994704 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.77 52.0 5.03e-01 70.7% 100.0%
4954763 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.72 49.0 4.16e-01 70.7% 66.7%
3402544 137.1.1.12 ↗ alpha bundles › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors › SCHIP-1_C 0.68 53.0 4.49e-01 84.5% 58.9%
3353941 1134.1.1.7 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 0.68 44.0 4.25e-01 82.8% 60.0%
3646179 4030.1.1.20 ↗ alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › Ovate 0.64 40.0 4.11e-01 91.4% 65.5%
3591419 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.63 41.0 3.40e-01 86.2% 37.1%
2073547 621.1.1.2 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.62 40.0 3.91e-01 86.2% 60.0%
4033012 4159.1.1.1 ↗ alpha arrays › SP0561-like › SP0561-like › SP0561-like › ScdA_N 0.62 49.0 4.61e-01 87.9% 84.3%
3730487 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 3.31e-01 77.6% 54.5%
3965865 6056.1.1.2 ↗ alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.61 47.0 4.05e-01 86.2% 71.6%
4015596 3873.1.1.0 ↗ a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain 0.59 40.0 3.20e-01 70.7% 45.0%
4954319 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.57 44.0 3.04e-01 91.4% 32.6%
4425508 6056.1.1.0 ↗ alpha arrays › SP1917-like › SP1917-like › SP1917-like 0.56 45.0 4.06e-01 93.1% 80.0%
3669177 4336.2.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 0.55 49.0 3.82e-01 100.0% 53.2%
4527579 186.1.1.23 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › PF27132 0.55 43.0 3.79e-01 87.9% 84.4%
3931089 4336.2.1.1 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 0.55 44.0 3.83e-01 87.9% 95.6%
4031198 604.15.1.2 ↗ alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like › Sbi-IV 0.54 39.0 3.99e-01 75.9% 80.0%
4615565 101.1.1.249 ↗ alpha arrays › HTH › HTH › Three-helical HTH › SGIII 0.54 43.0 3.77e-01 86.2% 80.0%
3226769 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 44.0 4.15e-01 94.8% 77.1%
3566439 101.1.2.97 ↗ alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.52 36.0 3.22e-01 72.4% 56.5%