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OR283206.1__WNY14825.1__SEA_MOONTOWERMANIA_31__00031

Bact-Vir

OR283206.1__WNY14825.1__SEA_MOONTOWERMANIA_31__00031

Identity

Accession:
OR283206 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stackebrandtviridae› Kroosvirus› Gordonia_phage_MoontowerMania

TaxID: 3075184

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-89
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v9kA01 1.10.10.2050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 42.0 5.01e-01 84.4% 100.0%
2r7dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 35.0 3.71e-01 87.0% 66.7%
1m9nA04 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.58 44.0 3.35e-01 84.4% 42.1%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.57 42.0 3.74e-01 80.5% 57.6%
3pvlA03 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.55 41.0 3.61e-01 92.2% 51.7%
2hz8A00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.54 40.0 3.63e-01 83.1% 97.4%
4u7bA01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 34.0 3.90e-01 93.5% 96.1%
3ibtA02 1.10.210.20 Mainly Alpha › Orthogonal Bundle › Uteroglobin › 0.54 41.0 4.34e-01 84.4% 95.7%
3c1aA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 40.0 3.19e-01 83.1% 53.7%
4cfsA02 1.10.210.20 Mainly Alpha › Orthogonal Bundle › Uteroglobin › 0.53 41.0 4.23e-01 84.4% 95.7%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.53 35.0 3.04e-01 71.4% 42.9%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.45e-01 96.1% 97.7%
3gcgB00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.52 44.0 3.61e-01 98.7% 85.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3696367 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 47.0 4.79e-01 97.4% 84.0%
3839206 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.56 42.0 4.24e-01 98.7% 77.5%
3884349 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.56 43.0 3.76e-01 84.4% 85.6%
3372591 170.1.1.15 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_2 0.56 38.0 3.47e-01 97.4% 51.4%
3879814 109.4.1.441 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TFCD_C 0.53 40.0 2.81e-01 83.1% 27.9%
None — 0.53 37.0 2.81e-01 71.4% 35.0%
3228852 103.11.1.1 ↗ alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N 0.52 35.0 3.77e-01 72.7% 83.1%
3437526 170.1.1.0 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C 0.51 36.0 3.29e-01 76.6% 62.7%
D2 high residues 94-168
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i6pA00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.60 42.0 3.03e-01 72.0% 80.4%
1hr7C02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 46.0 3.41e-01 97.3% 85.3%
5j6bD01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.54 43.0 2.89e-01 86.7% 46.0%
3kraC00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 44.0 3.11e-01 97.3% 68.3%
4uskA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.51 41.0 3.37e-01 93.3% 79.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3734131 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.66 43.0 4.55e-01 88.0% 76.9%
3448922 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.62 36.0 2.51e-01 82.7% 17.9%
3624011 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.62 50.0 3.93e-01 90.7% 65.9%
3629127 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.59 50.0 4.06e-01 100.0% 96.8%
3196323 101.11.1.0 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.58 48.0 4.62e-01 92.0% 78.8%
5029642 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.56 34.0 3.14e-01 97.3% 47.4%
5047099 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 43.0 3.28e-01 93.3% 33.0%
5016947 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 43.0 3.20e-01 86.7% 92.0%
3880705 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.50 43.0 3.71e-01 98.7% 66.4%