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OR296290.1__WNL49167.1__X__00033
Bact-VirOR296290.1__WNL49167.1__X__00033
Identity
- Accession:
- OR296290 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Mtkvariviridae›
Kuravirus›
Escherichia_phage_SDYTW1-F1-2-2_3
TaxID: 3073059
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-55
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.74 | 51.0 | 5.66e-01 | 86.0% | 100.0% |
| 2pptA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.70 | 47.0 | 5.16e-01 | 88.0% | 97.3% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.66 | 46.0 | 4.51e-01 | 100.0% | 66.7% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.58 | 42.0 | 3.22e-01 | 80.0% | 84.4% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.57 | 46.0 | 3.25e-01 | 100.0% | 87.8% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 44.0 | 4.32e-01 | 84.0% | 84.9% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 35.0 | 2.95e-01 | 72.0% | 32.0% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.55 | 38.0 | 3.71e-01 | 72.0% | 71.9% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.55 | 39.0 | 3.74e-01 | 76.0% | 73.3% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 42.0 | 2.73e-01 | 88.0% | 34.9% |
| 6lf2B01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 42.0 | 3.23e-01 | 88.0% | 76.6% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 39.0 | 2.95e-01 | 88.0% | 33.3% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.75e-01 | 86.0% | 73.2% |
| 2drpA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 30.0 | 3.27e-01 | 84.0% | 82.8% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.51 | 41.0 | 3.49e-01 | 98.0% | 71.6% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 36.0 | 3.22e-01 | 78.0% | 62.8% |
| 1yuiA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.50 | 31.0 | 3.05e-01 | 80.0% | 55.6% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.50 | 41.0 | 3.70e-01 | 96.0% | 65.3% |
| 5ekcF01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 38.0 | 2.48e-01 | 92.0% | 71.3% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3440950 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.77 | 57.0 | 6.19e-01 | 84.0% | 100.0% |
| 5000687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 57.0 | 5.45e-01 | 90.0% | 79.3% |
| 3388125 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 52.0 | 5.43e-01 | 88.0% | 91.1% |
| 3497994 | 375.1.1.208 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-DNL | 0.69 | 54.0 | 5.40e-01 | 88.0% | 86.0% |
| 4401347 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.69 | 49.0 | 4.85e-01 | 88.0% | 70.9% |
| 3599921 | 375.3.1.0 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger | 0.68 | 52.0 | 4.84e-01 | 88.0% | 67.2% |
| 3750819 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.68 | 56.0 | 4.25e-01 | 100.0% | 60.4% |
| 4181029 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.67 | 50.0 | 5.11e-01 | 90.0% | 83.7% |
| 4221958 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.67 | 50.0 | 5.24e-01 | 90.0% | 91.1% |
| 5032187 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 52.0 | 5.10e-01 | 88.0% | 89.1% |
| 4025629 | 375.3.1.1 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-DNL | 0.67 | 51.0 | 4.38e-01 | 88.0% | 50.6% |
| 3940003 | 375.3.1.0 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger | 0.67 | 58.0 | 5.15e-01 | 100.0% | 72.0% |
| 4945002 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 48.0 | 4.97e-01 | 98.0% | 91.1% |
| 3902130 | 375.1.1.107 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Dynactin_p62 | 0.62 | 37.0 | 3.37e-01 | 90.0% | 42.0% |
| 3777035 | 11.1.1.504 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Dynactin_p62 | 0.62 | 37.0 | 3.34e-01 | 90.0% | 42.0% |
| 3929103 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.62 | 49.0 | 4.71e-01 | 92.0% | 96.7% |
| 4286254 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.61 | 38.0 | 2.89e-01 | 92.0% | 24.2% |
| 3187819 | 3736.1.1.0 ↗ | alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 | 0.60 | 40.0 | 2.89e-01 | 90.0% | 22.6% |
| 5050527 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 43.0 | 4.41e-01 | 88.0% | 91.1% |
| 4234747 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.57 | 41.0 | 3.95e-01 | 78.0% | 70.7% |
| 4011434 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 39.0 | 3.33e-01 | 90.0% | 41.1% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.56 | 43.0 | 3.30e-01 | 92.0% | 47.8% |
| 4096474 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.55 | 39.0 | 3.95e-01 | 78.0% | 82.0% |
| 3735204 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.55 | 43.0 | 2.74e-01 | 100.0% | 44.8% |
| 3689856 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 42.0 | 4.14e-01 | 98.0% | 93.3% |
| 3946755 | 605.1.1.26 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2058 | 0.54 | 40.0 | 3.24e-01 | 88.0% | 43.5% |
| 3174804 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 40.0 | 4.04e-01 | 82.0% | 94.0% |
| 4303049 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.53 | 42.0 | 3.23e-01 | 98.0% | 45.7% |
| 3939505 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.52 | 29.0 | 3.15e-01 | 84.0% | 65.0% |
| 4669977 | 239.2.1.0 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like | 0.52 | 41.0 | 3.35e-01 | 96.0% | 58.2% |
| 4928227 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.51 | 39.0 | 3.56e-01 | 88.0% | 78.1% |
| 5041606 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 39.0 | 3.66e-01 | 88.0% | 80.0% |
| 5075839 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.51 | 39.0 | 3.13e-01 | 98.0% | 50.8% |
| 5050682 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 38.0 | 2.47e-01 | 84.0% | 56.7% |
| 3939849 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.50 | 35.0 | 2.54e-01 | 90.0% | 23.9% |
| 3304083 | 80.1.1.0 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain | 0.50 | 36.0 | 3.12e-01 | 78.0% | 78.8% |
| 3858618 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.50 | 39.0 | 3.52e-01 | 96.0% | 58.7% |