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OR296290.1__WNL49176.1__X__00042

Bact-Vir

OR296290.1__WNL49176.1__X__00042

Identity

Accession:
OR296290 ↗
Kingdom:
phage

Quality

84.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mtkvariviridae› Kuravirus› Escherichia_phage_SDYTW1-F1-2-2_3

TaxID: 3073059

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-119
PDB
Domain cluster: rep: MZ520832.1__QYC52633.1__X__00203__D26-123
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.78 70.0 5.32e-01 100.0% 78.4%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.71 64.0 5.09e-01 100.0% 92.8%
3e29B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.71 51.0 4.24e-01 100.0% 45.5%
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.71 64.0 4.95e-01 100.0% 97.2%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.71 64.0 4.94e-01 100.0% 93.2%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.70 62.0 4.94e-01 97.6% 100.0%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.70 54.0 4.76e-01 80.5% 87.6%
3holA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.69 62.0 5.13e-01 100.0% 94.5%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 48.0 4.14e-01 100.0% 48.0%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.68 39.0 4.77e-01 97.6% 88.7%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 56.0 4.86e-01 100.0% 90.8%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.64 58.0 5.33e-01 100.0% 94.4%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.63 56.0 5.51e-01 98.8% 100.0%
2essA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 43.0 4.07e-01 96.3% 60.6%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.59 49.0 3.55e-01 93.9% 98.4%
1e2rA02 2.140.10.20 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 0.59 50.0 3.20e-01 95.1% 88.2%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 40.0 3.81e-01 100.0% 58.4%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.59 50.0 4.12e-01 100.0% 81.5%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 51.0 4.03e-01 100.0% 62.2%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.58 37.0 4.00e-01 100.0% 78.8%
4qfwA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.58 49.0 3.40e-01 91.5% 88.2%
1s5uE00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 46.0 3.86e-01 100.0% 51.5%
2ownA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 46.0 3.17e-01 100.0% 27.3%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 50.0 4.29e-01 97.6% 78.5%
4j0xA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 43.0 2.86e-01 82.9% 96.2%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 45.0 3.24e-01 89.0% 83.1%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.56 50.0 3.41e-01 100.0% 96.1%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.56 46.0 4.40e-01 98.8% 76.6%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.86e-01 86.6% 24.9%
3hlbD00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 43.0 2.89e-01 89.0% 91.9%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 40.0 3.44e-01 79.3% 52.6%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 42.0 2.95e-01 87.8% 85.1%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.83e-01 89.0% 35.9%
3waiA02 2.60.40.3390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 3.65e-01 100.0% 65.6%
2ov9C01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 48.0 3.95e-01 100.0% 96.6%
2o3bB00 3.40.1460.10 Alpha Beta › 3-Layer(aba) Sandwich › Nuia › Nuclease A inhibitor-like 0.52 40.0 3.44e-01 82.9% 94.1%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 3.02e-01 97.6% 92.7%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 47.0 4.10e-01 98.8% 94.4%
2fs2B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 48.0 3.99e-01 100.0% 72.5%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.52 42.0 3.65e-01 86.6% 69.6%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.70e-01 81.7% 96.2%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 48.0 4.16e-01 100.0% 85.1%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.80e-01 92.7% 40.1%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.52 44.0 4.11e-01 100.0% 87.0%
4hjhA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.51 43.0 4.04e-01 100.0% 75.2%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.51 40.0 3.20e-01 86.6% 88.7%
4a6fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 44.0 4.07e-01 95.1% 87.6%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.51 45.0 4.05e-01 98.8% 81.7%
3s4kA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 47.0 4.03e-01 100.0% 83.1%
1q6wG00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 46.0 3.73e-01 100.0% 96.6%
4czwA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 40.0 2.61e-01 95.1% 18.6%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4086880 9.1.1.14 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.79 73.0 5.90e-01 100.0% 96.6%
4029929 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.71 64.0 4.57e-01 100.0% 82.5%
3509731 71.1.1.19 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.68 60.0 4.45e-01 100.0% 91.8%
3259296 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.66 57.0 4.77e-01 100.0% 94.7%
3251994 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 51.0 4.36e-01 87.8% 76.0%
4989783 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.62 45.0 2.88e-01 78.0% 32.3%
4099756 4252.1.1.3 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.62 55.0 4.11e-01 100.0% 84.8%
4441857 3347.1.1.6 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531, TEN_YD-shell 0.60 46.0 3.01e-01 84.1% 31.0%
4650312 9.1.1.67 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PF29223 0.60 53.0 4.79e-01 100.0% 89.6%
5023504 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.60 44.0 2.80e-01 81.7% 34.5%
5083149 331.3.1.19 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.59 50.0 3.53e-01 91.5% 52.2%
4119187 3735.1.1.12 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell 0.59 46.0 2.61e-01 85.4% 12.5%
4987287 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 43.0 3.24e-01 78.0% 46.5%
3626322 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.14e-01 89.0% 34.4%
4570038 3735.1.1.14 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell 0.57 49.0 2.80e-01 97.6% 28.2%
3940294 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 47.0 2.80e-01 89.0% 19.7%
5000646 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.57 45.0 4.34e-01 100.0% 74.7%
3739225 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.54 47.0 2.97e-01 92.7% 26.1%
3601400 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.54 42.0 2.70e-01 87.8% 33.0%
3627380 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 41.0 2.88e-01 87.8% 92.9%
None — 0.53 46.0 3.07e-01 98.8% 94.8%
4456367 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.53 45.0 3.92e-01 92.7% 70.4%
3512162 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 42.0 2.73e-01 95.1% 18.7%
4025089 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.53 46.0 3.07e-01 100.0% 99.7%
3591827 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.53 44.0 3.70e-01 90.2% 71.1%
3829614 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.53 43.0 2.72e-01 89.0% 22.6%
3684619 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 42.0 2.76e-01 87.8% 88.6%
3272654 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 41.0 3.90e-01 85.4% 71.0%
3936459 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 3.64e-01 87.8% 76.0%
3276881 11.2.1.32 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK_N 0.52 44.0 3.38e-01 98.8% 85.6%
4073600 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.52 44.0 3.97e-01 90.2% 73.4%
4678616 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.52 46.0 2.98e-01 100.0% 94.9%
4957753 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.52 43.0 3.45e-01 89.0% 81.9%
None — 0.52 46.0 2.99e-01 100.0% 95.9%
4975997 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.52 43.0 3.56e-01 89.0% 91.4%
3397338 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.52 43.0 3.58e-01 90.2% 74.3%
3204498 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.52 45.0 2.91e-01 100.0% 98.1%
4934724 300.1.1.6 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.51 42.0 3.47e-01 89.0% 80.7%
4947623 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.51 43.0 4.05e-01 93.9% 77.0%
3785778 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 45.0 3.01e-01 98.8% 35.7%
3266202 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.87e-01 95.1% 32.4%
3856140 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.51 47.0 3.90e-01 100.0% 77.9%
3631969 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.51 40.0 2.47e-01 86.6% 15.2%
4002209 4135.1.1.1 ↗ beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like › CXXC_Zn-b_euk 0.51 44.0 3.83e-01 100.0% 62.4%
3882656 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.68e-01 87.8% 37.2%
3499768 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 2.89e-01 95.1% 38.0%
3602008 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 2.51e-01 95.1% 18.8%
None — 0.50 41.0 2.65e-01 89.0% 20.7%
3992138 11.2.1.52 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem 0.50 41.0 3.47e-01 92.7% 98.0%
5004510 300.1.1.6 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.50 41.0 3.33e-01 89.0% 88.4%
142587 331.3.1.9 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.50 39.0 3.34e-01 85.4% 79.4%