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OR296437.1__WLZ21069.1__C185S2P_00025__00025

Bact-Vir

OR296437.1__WLZ21069.1__C185S2P_00025__00025

Identity

Accession:
OR296437 ↗
Kingdom:
phage

Quality

82.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacteroides_phage_C1_85S2P

TaxID: 3070807

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-116
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 50.0 5.57e-01 100.0% 96.3%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.69 45.0 4.85e-01 100.0% 82.8%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 50.0 4.98e-01 100.0% 74.7%
5ygbA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 46.0 3.88e-01 88.9% 99.2%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 47.0 4.91e-01 100.0% 97.0%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 46.0 4.22e-01 98.6% 66.7%
3m33A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 40.0 2.91e-01 75.0% 90.5%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.56 45.0 3.37e-01 91.7% 84.5%
4rmoA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.55 48.0 3.84e-01 100.0% 63.0%
6ui4A01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.55 41.0 3.86e-01 79.2% 87.5%
3hl8A02 3.30.1520.20 Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 0.55 49.0 3.98e-01 100.0% 57.5%
4rg8A02 3.30.1520.20 Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 0.54 48.0 3.88e-01 100.0% 60.0%
1br2A03 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.54 40.0 3.65e-01 77.8% 66.3%
1qviA01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.54 40.0 3.42e-01 77.8% 67.0%
2cpxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 38.0 3.70e-01 73.6% 82.3%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.50 38.0 3.83e-01 84.7% 92.0%
1dd5A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.50 38.0 3.82e-01 86.1% 92.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3626068 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 5.28e-01 100.0% 98.3%
3503332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 5.24e-01 100.0% 96.9%
4029199 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 2.84e-01 100.0% 7.6%
3625002 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 49.0 3.28e-01 100.0% 22.8%
3941573 4.1.1.413 ↗ beta barrels › SH3 › SH3 › SH3 › Exonuc_X-T_C 0.56 50.0 4.02e-01 100.0% 59.3%
3784425 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 48.0 4.04e-01 100.0% 68.3%
3785005 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 42.0 4.16e-01 87.5% 96.2%
4016863 1.1.9.27 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 0.53 41.0 3.40e-01 84.7% 83.7%
3481585 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 41.0 3.83e-01 84.7% 75.6%