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OR296437.1__WLZ21070.1__C185S2P_00026__00026

Bact-Vir

OR296437.1__WLZ21070.1__C185S2P_00026__00026

Identity

Accession:
OR296437 ↗
Kingdom:
phage

Quality

73.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-52
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.72 50.0 3.68e-01 73.9% 64.5%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.68 51.0 5.40e-01 89.1% 100.0%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 51.0 4.05e-01 87.0% 66.3%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 55.0 4.97e-01 95.7% 69.7%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.67 52.0 4.98e-01 93.5% 78.9%
4d05A01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.67 53.0 4.46e-01 87.0% 56.6%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 50.0 3.99e-01 87.0% 67.0%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 50.0 3.08e-01 87.0% 51.0%
7oode01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.65 47.0 4.27e-01 82.6% 100.0%
3bt7A02 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 41.0 2.87e-01 89.1% 20.7%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 55.0 4.49e-01 100.0% 78.7%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 49.0 3.77e-01 87.0% 49.5%
1nrkA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.62 43.0 3.61e-01 73.9% 89.7%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 52.0 4.30e-01 100.0% 76.7%
6uf3A00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.62 53.0 3.32e-01 97.8% 78.3%
4o2zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 48.0 3.36e-01 87.0% 57.5%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 39.0 3.44e-01 82.6% 41.1%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.61 51.0 4.08e-01 100.0% 50.5%
3id6A01 3.30.420.220 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.60 43.0 3.42e-01 80.4% 54.7%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 43.0 3.39e-01 84.8% 65.8%
3ephA03 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 41.0 3.96e-01 73.9% 74.1%
1cnzA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.59 48.0 2.92e-01 93.5% 18.5%
1bpeA04 3.30.210.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain 0.58 40.0 3.77e-01 73.9% 57.6%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 40.0 2.43e-01 73.9% 20.4%
3spdA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.58 45.0 3.04e-01 91.3% 37.5%
3d89A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.58 43.0 3.16e-01 84.8% 29.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 3.82e-01 71.7% 62.7%
3vsvA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 42.0 3.17e-01 84.8% 96.9%
3g7kA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.55 39.0 2.64e-01 73.9% 41.8%
2im9A02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.55 40.0 3.03e-01 87.0% 59.2%
4d0yA00 3.30.1380.10 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › 0.55 39.0 2.71e-01 80.4% 95.7%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 40.0 3.56e-01 80.4% 57.1%
7r0kA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.54 39.0 2.84e-01 84.8% 95.8%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 49.0 3.01e-01 100.0% 31.4%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.54 41.0 2.63e-01 87.0% 73.8%
2pvpA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 39.0 3.04e-01 82.6% 47.1%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 3.48e-01 93.5% 52.1%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.53 42.0 3.60e-01 91.3% 54.1%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 44.0 3.46e-01 93.5% 89.9%
3iwaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 2.98e-01 93.5% 49.7%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 2.91e-01 95.7% 95.2%
1ul4A01 4.10.1100.10 Few Secondary Structures › Irregular › DNA-binding domain of squamosa promoter binding protein-like 12 (lacking the second zinc- binding site) › Transcription factor, SBP-box domain 0.51 34.0 3.18e-01 78.3% 50.8%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 39.0 2.93e-01 91.3% 90.8%
7cr6D01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.51 42.0 3.55e-01 95.7% 74.4%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.51 37.0 3.34e-01 89.1% 57.1%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 41.0 3.18e-01 93.5% 45.0%
6whjD00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 42.0 2.66e-01 100.0% 24.2%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.50 39.0 2.93e-01 89.1% 61.7%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5079258 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.83 66.0 6.66e-01 89.1% 91.1%
3542422 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 59.0 6.25e-01 84.8% 90.0%
3928803 4967.1.1.0 alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.79 65.0 4.25e-01 93.5% 24.0%
3164102 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.75 60.0 6.05e-01 91.3% 97.8%
3699899 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.74 64.0 4.76e-01 100.0% 41.7%
3578805 311.1.1.2 a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto 0.74 46.0 3.44e-01 97.8% 26.4%
3658440 386.1.1.26 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 0.71 51.0 4.86e-01 84.8% 63.6%
3483313 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 47.0 4.51e-01 71.7% 58.2%
4058764 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.71 53.0 4.64e-01 84.8% 94.5%
5026901 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 49.0 4.56e-01 76.1% 65.0%
4992470 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.69 59.0 5.46e-01 97.8% 76.7%
4989457 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 49.0 4.83e-01 76.1% 72.0%
3478119 377.1.1.91 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › FAP206 0.68 51.0 4.45e-01 84.8% 92.0%
3225702 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.68 51.0 5.35e-01 82.6% 100.0%
3618540 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.67 51.0 4.53e-01 89.1% 58.7%
3702955 2004.1.1.427 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.67 52.0 3.40e-01 89.1% 17.8%
3577308 330.3.1.0 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.67 50.0 4.86e-01 89.1% 80.0%
3882796 1021.1.1.2 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.67 53.0 4.53e-01 95.7% 69.4%
3483955 386.1.1.6 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 0.67 53.0 4.37e-01 89.1% 49.4%
5020790 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.67 53.0 5.08e-01 91.3% 85.5%
5077254 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.66 48.0 2.70e-01 100.0% 7.2%
3889228 386.1.1.66 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Spt46 0.66 53.0 4.50e-01 89.1% 59.0%
5061231 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.66 54.0 5.08e-01 100.0% 83.3%
5015133 4100.1.1.9 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 0.66 49.0 4.55e-01 84.8% 63.3%
3979711 252.2.1.6 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_2 0.65 50.0 4.61e-01 91.3% 76.9%
3296731 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.65 46.0 4.70e-01 87.0% 82.2%
4959480 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.65 53.0 5.01e-01 100.0% 80.0%
4959886 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.65 49.0 4.63e-01 84.8% 69.1%
4944397 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 46.0 4.53e-01 78.3% 80.0%
5047657 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 47.0 4.53e-01 84.8% 76.4%
4568757 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.63 51.0 4.84e-01 100.0% 80.0%
3470252 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.62 51.0 3.94e-01 100.0% 40.0%
2391944 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.62 52.0 4.25e-01 95.7% 89.8%
3521181 4.1.1.229 beta barrels › SH3 › SH3 › SH3 0.62 49.0 3.35e-01 91.3% 29.7%
3587925 220.1.1.242 beta barrels › PH domain-like › PH domain-like › PH domain-like › EbsA 0.62 47.0 4.13e-01 89.1% 53.3%
3877107 1170.1.1.3 beta barrels › IL8-related › IL8-related › IL8 › CXCL16 0.61 45.0 3.84e-01 80.4% 53.3%
4060639 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.61 45.0 2.65e-01 80.4% 38.5%
3969874 2484.2.1.0 mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain 0.60 44.0 3.89e-01 87.0% 55.0%
5044373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 42.0 3.90e-01 73.9% 58.3%
3602759 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 43.0 4.10e-01 91.3% 63.3%
3760738 4357.1.1.9 beta barrels › WWE domain › WWE domain › WWE domain › WWE, WWE_3 0.60 47.0 3.39e-01 93.5% 72.5%
3415555 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 41.0 2.53e-01 73.9% 22.1%
1149286 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.59 37.0 2.46e-01 89.1% 14.1%
3485317 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 48.0 2.75e-01 100.0% 32.7%
3240415 386.1.1.23 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_3 0.59 40.0 4.30e-01 80.4% 97.1%
4665972 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.59 47.0 2.79e-01 91.3% 19.2%
3952393 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.58 48.0 2.99e-01 93.5% 31.9%
4104975 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.58 46.0 2.76e-01 93.5% 19.7%
3483224 3914.1.1.1 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin 0.58 47.0 2.65e-01 91.3% 23.6%
3537276 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.57 47.0 3.88e-01 100.0% 49.5%
5044987 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 40.0 3.20e-01 78.3% 46.7%
4970991 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 46.0 3.41e-01 100.0% 99.2%
4281576 7101.1.1.1 extended segments › Prp8-binding region of SLU7 › Prp8-binding region of SLU7 › Prp8-binding region of SLU7 › Slu7 0.51 42.0 3.18e-01 93.5% 42.6%
3405303 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.51 40.0 2.41e-01 91.3% 13.9%
4063517 2498.1.1.40 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M66 0.50 40.0 2.57e-01 100.0% 85.6%