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OR296439.1__WLZ21175.1__C341T2LP_00029__00029

Bact-Vir

OR296439.1__WLZ21175.1__C341T2LP_00029__00029

Identity

Accession:
OR296439 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacteroides_phage_C3_41T2LP

TaxID: 3070809

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-128
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08299.18 best Bac_DnaA_C 34.3 2.80e-08 67.1% 66.7%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.92 83.0 8.03e-01 100.0% 86.2%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 51.0 6.52e-01 89.4% 96.2%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 51.0 6.40e-01 83.5% 94.4%
1l8qA03 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.86 76.0 6.96e-01 100.0% 74.8%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 48.0 5.54e-01 82.4% 79.4%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 46.0 4.76e-01 71.8% 71.8%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 49.0 4.99e-01 84.7% 84.1%
1x2lA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 34.0 3.46e-01 70.6% 50.6%
1uujA00 1.20.960.30 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.61 40.0 4.19e-01 90.6% 73.7%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.60 49.0 4.72e-01 100.0% 78.1%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 4.35e-01 76.5% 96.4%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.75e-01 82.4% 96.2%
3u4qB04 6.10.140.1030 Special › Helix non-globular › Helix Hairpins › 0.57 43.0 4.68e-01 94.1% 100.0%
2es9A00 1.20.1290.30 Mainly Alpha › Up-down Bundle › AhpD-like › 0.57 49.0 4.66e-01 96.5% 85.0%
3g2eB00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.57 42.0 3.32e-01 78.8% 94.6%
4b7hA03 1.20.1370.60 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › 0.56 40.0 3.63e-01 74.1% 55.7%
3ccyA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 39.0 3.29e-01 74.1% 75.5%
2np5D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 46.0 3.80e-01 96.5% 62.0%
1sw6A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.53 45.0 3.25e-01 95.3% 74.4%
4ivfA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 37.0 3.32e-01 72.9% 75.0%
1wmwB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.51 41.0 2.90e-01 91.8% 42.3%
1u3dA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 38.0 3.27e-01 100.0% 49.3%
1ex0B02 3.90.260.10 Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like 0.51 41.0 2.81e-01 89.4% 50.6%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4437729 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 84.0 7.83e-01 98.8% 79.0%
4165809 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 79.0 7.91e-01 92.9% 87.1%
4197050 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.92 84.0 7.72e-01 100.0% 77.1%
4606105 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 81.0 7.59e-01 97.6% 79.0%
4266587 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 81.0 7.81e-01 100.0% 84.2%
4106860 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 83.0 7.91e-01 100.0% 85.3%
4604979 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 81.0 7.52e-01 100.0% 76.9%
4051624 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 82.0 7.53e-01 100.0% 77.1%
4270831 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.91 82.0 7.52e-01 100.0% 77.1%
3385990 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 81.0 7.50e-01 100.0% 77.1%
4559046 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 81.0 7.46e-01 100.0% 77.1%
4125972 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 79.0 7.39e-01 97.6% 79.0%
144712 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 77.0 7.03e-01 100.0% 72.0%
4529157 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.90 79.0 7.75e-01 97.6% 87.8%
4102935 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.89 80.0 7.36e-01 100.0% 77.1%
4174198 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.88 78.0 7.39e-01 100.0% 81.0%
4601417 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 78.0 7.50e-01 100.0% 85.3%
4606821 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 81.0 7.58e-01 100.0% 83.0%
4146099 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 81.0 7.74e-01 100.0% 87.4%
4067934 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 76.0 7.42e-01 95.3% 86.7%
4533441 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 78.0 7.49e-01 100.0% 85.3%
4347676 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 76.0 7.45e-01 97.6% 87.8%
4281674 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.87 78.0 7.23e-01 100.0% 78.1%
4346134 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 79.0 7.32e-01 100.0% 80.8%
3946360 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 53.0 5.95e-01 77.6% 89.2%
5073796 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 60.0 5.79e-01 80.0% 72.6%
3941666 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.77 53.0 5.65e-01 84.7% 81.1%
4927804 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 52.0 5.57e-01 72.9% 93.3%
5079733 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 44.0 4.65e-01 71.8% 70.7%
3984597 101.1.2.488 ↗ alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 0.70 55.0 5.43e-01 83.5% 84.4%
4583731 2484.1.1.231 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66, DDE_Tnp_IS66_C 0.69 55.0 3.85e-01 84.7% 87.7%
4935262 101.8.1.2 ↗ alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.69 50.0 4.06e-01 88.2% 40.6%
3590474 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 54.0 5.47e-01 85.9% 84.7%
4336911 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 45.0 4.91e-01 72.9% 85.7%
3672635 101.1.1.295 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 0.64 47.0 4.99e-01 85.9% 89.3%
3600363 101.21.1.0 ↗ alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit 0.61 48.0 4.05e-01 84.7% 65.0%
3396463 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.61 47.0 4.51e-01 85.9% 91.0%
5036279 4156.1.1.7 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 0.60 51.0 4.03e-01 94.1% 82.2%
4998572 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 42.0 4.21e-01 75.3% 74.1%
3700443 101.1.1.176 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DEK_C 0.59 42.0 4.62e-01 87.1% 98.5%
4970998 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.59 46.0 4.41e-01 83.5% 72.0%
3255571 109.4.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 0.58 42.0 3.35e-01 84.7% 36.1%
3593619 603.1.1.17 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.52 40.0 2.97e-01 84.7% 91.5%
3331556 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.51 33.0 3.19e-01 70.6% 56.8%
4981270 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 39.0 2.58e-01 81.2% 37.3%