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OR327748.1__WMM91484.1__X__00061

Bact-Vir

OR327748.1__WMM91484.1__X__00061

Identity

Accession:
OR327748 ↗
Kingdom:
phage

Quality

63.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-62
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ybtB00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.77 47.0 3.15e-01 100.0% 18.0%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.77 59.0 4.31e-01 86.0% 31.8%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.70 59.0 4.69e-01 94.0% 100.0%
3ihlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 39.0 2.51e-01 98.0% 12.2%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 52.0 3.82e-01 86.0% 30.8%
1pjqA02 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.63 34.0 3.89e-01 94.0% 63.9%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.61 48.0 3.39e-01 100.0% 26.9%
2hjjA00 3.30.160.130 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains 0.57 42.0 3.92e-01 82.0% 72.7%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 37.0 2.71e-01 74.0% 22.8%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 39.0 3.93e-01 88.0% 92.7%
1qh5A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 39.0 2.61e-01 88.0% 48.1%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.52 37.0 3.11e-01 80.0% 50.5%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 35.0 2.94e-01 72.0% 65.9%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.51 36.0 2.74e-01 80.0% 36.0%
1xm8A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 35.0 2.35e-01 76.0% 49.2%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.51 36.0 2.91e-01 82.0% 41.0%
2h84A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 43.0 3.13e-01 100.0% 34.5%
2nscA01 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.50 42.0 3.66e-01 98.0% 61.5%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4678702 3304.1.1.2 a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N 0.77 59.0 4.33e-01 86.0% 32.8%
4213802 3304.1.1.2 a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N 0.77 58.0 4.18e-01 86.0% 29.3%
3582172 922.1.1.7 few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_ADAMTS 0.76 54.0 4.04e-01 76.0% 40.0%
3518991 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.75 47.0 4.06e-01 100.0% 42.7%
3222502 922.1.1.7 few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_ADAMTS 0.67 46.0 4.43e-01 74.0% 80.0%
4392916 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.66 51.0 3.43e-01 100.0% 23.4%
4314504 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.66 54.0 4.04e-01 94.0% 40.7%
4959386 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 35.0 3.60e-01 90.0% 52.0%
3796193 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 48.0 3.39e-01 100.0% 28.3%
3837975 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 47.0 3.32e-01 84.0% 27.9%
3307718 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.59 48.0 3.77e-01 98.0% 60.0%
3907112 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.58 43.0 4.04e-01 92.0% 66.2%
5030079 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.56 49.0 2.82e-01 98.0% 49.9%
3269549 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 44.0 3.25e-01 94.0% 31.0%
4270467 2002.1.1.45 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd 0.55 46.0 2.87e-01 100.0% 95.5%
3959182 304.48.1.41 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF2652 0.54 43.0 2.89e-01 86.0% 47.9%
3749631 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.53 46.0 3.62e-01 96.0% 55.2%
3442564 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.53 37.0 3.71e-01 78.0% 74.5%
2604100 7575.1.1.4 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 0.53 40.0 2.50e-01 86.0% 65.9%
3434453 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.53 36.0 3.77e-01 76.0% 94.7%
3619402 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.53 34.0 2.75e-01 92.0% 32.4%
3381279 109.2.1.64 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_63, MGH1-like_GH 0.52 45.0 2.60e-01 96.0% 11.4%
5081200 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 39.0 3.61e-01 80.0% 91.7%