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OR338916.1__WNL49456.1__X__00008

Bact-Vir

OR338916.1__WNL49456.1__X__00008

Identity

Accession:
OR338916 ↗
Kingdom:
phage

Quality

93.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-66
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.79 62.0 5.93e-01 85.2% 90.1%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.77 53.0 3.90e-01 77.0% 28.0%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 60.0 5.58e-01 85.2% 85.5%
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.72 60.0 3.78e-01 91.8% 45.5%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 56.0 5.10e-01 85.2% 72.8%
3j7yd00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 57.0 4.18e-01 86.9% 79.6%
4o7iA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.72 52.0 3.67e-01 77.0% 28.6%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 61.0 4.72e-01 98.4% 61.0%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.71 53.0 4.30e-01 80.3% 61.0%
4g59B00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.70 52.0 3.87e-01 82.0% 76.1%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.70 57.0 4.28e-01 90.2% 56.4%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.69 60.0 4.95e-01 100.0% 92.0%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 52.0 5.03e-01 83.6% 78.9%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.69 56.0 4.08e-01 93.4% 86.9%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.68 58.0 4.01e-01 100.0% 73.0%
4r7rA00 3.30.1490.410 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 0.68 53.0 4.29e-01 86.9% 75.4%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.68 50.0 4.49e-01 80.3% 55.7%
2bkkA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 49.0 4.30e-01 77.0% 96.7%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 56.0 4.41e-01 98.4% 61.4%
2q83B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 52.0 4.45e-01 85.2% 91.9%
3rf9B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 52.0 3.36e-01 85.2% 43.7%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.66 57.0 4.35e-01 100.0% 79.1%
3dueA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.66 56.0 4.42e-01 95.1% 71.7%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.66 46.0 3.86e-01 78.7% 42.1%
3p0lD00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 57.0 4.12e-01 100.0% 42.7%
2rqxA00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 45.0 4.13e-01 72.1% 88.9%
1rwiA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 54.0 3.52e-01 90.2% 40.2%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.64 45.0 4.56e-01 77.0% 90.5%
3ci0J01 3.10.610.10 Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like 0.64 52.0 4.50e-01 95.1% 89.4%
2jozA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 55.0 4.78e-01 100.0% 95.8%
2r1bA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 44.0 3.10e-01 73.8% 37.9%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 45.0 3.84e-01 77.0% 94.1%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.62 50.0 3.97e-01 100.0% 40.4%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.62 48.0 4.42e-01 86.9% 64.3%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 48.0 3.07e-01 91.8% 30.4%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.60 51.0 3.43e-01 100.0% 29.6%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 46.0 3.76e-01 86.9% 56.7%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.59 41.0 3.21e-01 75.4% 34.4%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.58 50.0 4.49e-01 100.0% 67.8%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 49.0 3.92e-01 96.7% 65.6%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 45.0 4.00e-01 86.9% 79.1%
3dtyB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 48.0 3.54e-01 100.0% 77.3%
3v5nB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 47.0 3.52e-01 100.0% 77.7%
1tluA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.57 48.0 3.99e-01 100.0% 65.0%
4e6xB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 46.0 2.95e-01 90.2% 18.6%
4h3vB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 46.0 3.24e-01 100.0% 77.3%
1wthA02 3.10.450.190 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 4.10e-01 100.0% 95.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 43.0 3.53e-01 85.2% 55.8%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.56 45.0 3.51e-01 98.4% 43.4%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.19e-01 95.1% 68.9%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.28e-01 96.7% 41.2%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.22e-01 98.4% 39.5%
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 2.81e-01 96.7% 24.0%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3712663 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.80 60.0 5.17e-01 80.3% 55.8%
3677365 312.1.1.19 a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 0.78 57.0 4.13e-01 77.0% 62.6%
3578232 77.3.1.4 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 0.77 56.0 3.75e-01 77.0% 20.9%
3451989 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.75 59.0 3.69e-01 85.2% 25.6%
3965259 243.3.1.16 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY_2 0.74 57.0 5.40e-01 85.2% 78.4%
5048797 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.74 52.0 4.44e-01 73.8% 63.2%
4988423 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.73 51.0 4.67e-01 73.8% 62.5%
4950432 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.72 54.0 3.77e-01 78.7% 60.5%
5039391 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 59.0 3.52e-01 91.8% 31.7%
3765027 5.1.4.85 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N 0.72 58.0 3.61e-01 91.8% 33.0%
3285772 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.71 55.0 3.61e-01 83.6% 56.7%
3485658 243.1.1.5 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 0.70 53.0 3.71e-01 85.2% 62.3%
4104620 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.70 52.0 3.39e-01 78.7% 33.1%
3916950 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.69 57.0 3.71e-01 91.8% 58.6%
3621363 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 58.0 3.70e-01 91.8% 44.9%
1170462 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.69 52.0 5.27e-01 83.6% 91.8%
3242312 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 56.0 3.61e-01 91.8% 41.0%
5044470 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.68 59.0 3.95e-01 100.0% 40.4%
3416871 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.68 48.0 3.48e-01 73.8% 42.9%
4013508 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 56.0 3.60e-01 100.0% 25.3%
4979079 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.67 59.0 3.99e-01 100.0% 42.6%
3589588 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.67 52.0 3.44e-01 85.2% 77.7%
3844416 5.1.4.229 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N 0.67 53.0 3.26e-01 88.5% 28.2%
4947399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 57.0 4.89e-01 93.4% 73.7%
4966488 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.66 49.0 4.66e-01 80.3% 98.7%
3968112 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.66 51.0 3.83e-01 85.2% 48.7%
3912697 292.2.1.3 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 0.66 49.0 4.05e-01 83.6% 44.5%
3546306 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.66 53.0 4.54e-01 86.9% 78.9%
3441990 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 54.0 3.33e-01 91.8% 38.6%
4964966 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.65 55.0 4.21e-01 98.4% 80.0%
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.65 56.0 5.07e-01 98.4% 70.6%
None 0.64 49.0 3.12e-01 83.6% 33.8%
3604520 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.64 56.0 3.68e-01 100.0% 43.3%
5068145 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.64 55.0 3.74e-01 100.0% 45.6%
3990496 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.64 46.0 4.42e-01 77.0% 78.6%
3643744 5.1.4.122 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 0.64 52.0 3.35e-01 91.8% 37.6%
4975637 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.62 54.0 4.98e-01 100.0% 78.8%
1760289 809.1.1.3 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF3862 0.62 48.0 4.42e-01 86.9% 64.3%
4012764 243.4.1.0 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like 0.62 47.0 4.94e-01 88.5% 94.5%
3618512 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.61 49.0 3.23e-01 88.5% 41.3%
3254426 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.61 46.0 3.70e-01 85.2% 53.3%
3282063 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.61 52.0 4.22e-01 100.0% 89.6%
3308424 5.3.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.61 44.0 3.39e-01 77.0% 92.1%
3211804 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 45.0 2.96e-01 80.3% 26.5%
3740897 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.60 45.0 2.91e-01 85.2% 26.6%
5024840 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.59 50.0 4.39e-01 100.0% 63.2%
3749834 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.59 43.0 4.49e-01 88.5% 89.1%
4259150 295.1.1.46 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › WapI 0.59 51.0 4.01e-01 100.0% 83.7%
5081796 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.59 40.0 3.00e-01 72.1% 27.6%
3597338 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 45.0 3.26e-01 91.8% 52.7%
3630312 7026.1.1.0 beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.58 42.0 2.55e-01 80.3% 10.1%
3659226 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.58 48.0 3.25e-01 93.4% 93.5%
5051699 331.10.2.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc 0.57 48.0 4.08e-01 100.0% 70.9%
3607579 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.57 47.0 3.98e-01 100.0% 73.7%
3874056 64.1.1.1 beta meanders › WW domain-like › WW domain › WW domain › WW 0.56 36.0 3.76e-01 82.0% 72.7%
5792 295.1.1.6 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.56 43.0 3.52e-01 85.2% 55.4%
3935139 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.55 48.0 3.69e-01 100.0% 51.7%
4423609 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.55 47.0 2.94e-01 98.4% 17.0%
441013 79.1.1.1 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp5_C 0.55 42.0 2.98e-01 88.5% 25.6%
4040004 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.54 46.0 2.91e-01 98.4% 17.2%
4381937 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.54 45.0 2.85e-01 98.4% 17.2%
3167601 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.53 44.0 3.95e-01 100.0% 77.9%