Back to structures

OR354820.1__WNM50407.1__Alsa1_CDS0057__00057

Bact-Vir

OR354820.1__WNM50407.1__Alsa1_CDS0057__00057

Identity

Accession:
OR354820 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-127
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gyxA01 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.63 35.0 4.38e-01 100.0% 96.9%
2rgyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 40.0 3.88e-01 100.0% 64.4%
2pvuA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 36.0 3.57e-01 100.0% 61.0%
3lubA01 3.40.50.10310 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Creatininase 0.54 45.0 3.62e-01 100.0% 45.2%
3kzgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 34.0 3.39e-01 100.0% 60.5%
1zmbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 47.0 3.70e-01 100.0% 58.7%
3ajaB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 45.0 3.55e-01 100.0% 43.6%
1qhhD01 3.30.160.800 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 30.0 3.62e-01 100.0% 88.2%
4tvvC00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 47.0 3.54e-01 100.0% 58.8%
4l0mA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 41.0 3.28e-01 86.4% 69.9%
2aizP01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.51 32.0 3.34e-01 96.6% 67.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4352085 7569.1.1.1 a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.87 67.0 5.49e-01 100.0% 47.0%
3386994 7569.1.1.1 a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.85 65.0 5.57e-01 100.0% 53.1%
1520985 7523.1.1.4 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.60 35.0 3.70e-01 96.6% 62.6%
3249581 7512.1.1.6 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.57 51.0 3.90e-01 100.0% 73.5%
1522218 7523.1.1.4 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.56 36.0 3.90e-01 100.0% 78.9%
2137603 315.1.1.2 a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase 0.54 29.0 3.75e-01 94.1% 100.0%
1520260 7523.1.1.4 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 0.52 33.0 3.70e-01 100.0% 87.4%
3586640 7526.1.1.0 a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 0.51 33.0 2.55e-01 100.0% 27.0%
5029625 7546.1.1.1 a/b three-layered sandwiches › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Asparaginase 0.50 45.0 3.68e-01 100.0% 71.6%
2814166 315.1.1.2 a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase 0.50 30.0 3.67e-01 93.2% 100.0%