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OR354820.1__WNM50564.1__Alsa1_CDS0214__00214

Bact-Vir

OR354820.1__WNM50564.1__Alsa1_CDS0214__00214

Identity

Accession:
OR354820 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Staphylococcus_phage_Alsa_1

TaxID: 3076561

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-81
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s3zA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 37.0 2.94e-01 74.6% 29.3%
2nrhB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 41.0 3.34e-01 74.6% 62.5%
7o71E01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 50.0 3.30e-01 100.0% 55.1%
4mamA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 37.0 3.41e-01 100.0% 49.5%
4v19F00 3.40.1370.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L4; Chain: A; › Ribosomal protein L4/L1 0.57 42.0 3.03e-01 83.1% 90.0%
4gx0B04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 38.0 3.23e-01 77.5% 44.3%
1lucB00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.51 44.0 2.90e-01 98.6% 52.2%
1hyuA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 34.0 3.19e-01 70.4% 67.4%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928140 7573.1.1.2 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N 0.80 70.0 4.68e-01 100.0% 26.0%
4986290 7573.1.1.1 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.77 65.0 4.66e-01 100.0% 33.0%
3702084 7573.1.1.9 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran, Pribosyl_synth 0.65 47.0 3.56e-01 77.5% 46.9%
3319380 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.63 34.0 2.98e-01 71.8% 32.7%
4377271 7573.1.1.9 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran, Pribosyl_synth 0.62 43.0 3.31e-01 76.1% 29.8%
3290748 7573.1.1.3 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyl_synth 0.62 45.0 3.41e-01 77.5% 47.1%
3954157 7573.1.1.9 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran, Pribosyl_synth 0.61 44.0 3.40e-01 77.5% 47.1%
4513468 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.60 42.0 3.57e-01 76.1% 43.8%
4678627 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 37.0 2.85e-01 70.4% 28.0%
3509758 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 38.0 3.08e-01 76.1% 66.3%
None — 0.52 36.0 2.14e-01 71.8% 27.7%
3470481 2004.1.1.144 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.52 36.0 2.66e-01 73.2% 80.0%
3987400 2006.1.1.37 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.52 43.0 2.93e-01 95.8% 49.5%
5082597 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 38.0 2.98e-01 81.7% 50.3%
4243034 2006.1.1.37 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.51 43.0 2.95e-01 97.2% 49.5%