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OR354822.1WNM50892.1Alsa3_CDS0023__00023

Bact-Vir

OR354822.1__WNM50892.1__Alsa3_CDS0023__00023

Identity

Accession:: OR354822 ↗
Kingdom:: phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Staphylococcus_phage_Alsa_3

TaxID: 3076563

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-146

PDB

Domain cluster: representative

CATH (32)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2v6yA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.79	59.0	6.55e-01	88.5%	100.0%
4wzxA01	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.77	57.0	6.25e-01	90.6%	100.0%
4hwhE00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.74	61.0	6.41e-01	88.5%	96.6%
1yo7A00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.73	64.0	5.94e-01	96.9%	81.7%
1nafA02	1.20.58.160	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.73	57.0	5.97e-01	84.4%	100.0%
2lxlA00	1.25.40.270	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1	0.72	56.0	4.70e-01	89.6%	49.1%
3onjA00	1.20.58.400	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins	0.71	59.0	5.92e-01	89.6%	100.0%
1t72A01	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.70	59.0	5.60e-01	94.8%	90.6%
1cgnA00	1.20.120.10	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562	0.70	59.0	5.40e-01	91.7%	80.6%
4hwdD00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.70	58.0	5.96e-01	90.6%	98.9%
1sziA02	1.20.120.340	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS	0.69	57.0	5.11e-01	90.6%	70.1%
2i0mA02	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.69	61.0	6.00e-01	95.8%	95.0%
1bf5A01	1.20.1050.20	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain	0.69	57.0	4.76e-01	90.6%	81.5%
2fefA01	1.20.1440.70	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › PA2201 N-terminal domain-like	0.69	61.0	5.64e-01	100.0%	91.2%
1cpqA00	1.20.120.10	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562	0.69	58.0	5.24e-01	91.7%	80.6%
1j1jA02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.68	55.0	5.74e-01	89.6%	98.8%
1vctA01	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.68	56.0	5.37e-01	89.6%	90.8%
4dlqA02	1.25.40.610	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.68	52.0	5.23e-01	85.4%	82.1%
2xl4A00	1.20.120.1420	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › LntA helical domain	0.68	57.0	4.92e-01	91.7%	70.7%
2nrjA01	1.20.1170.10	Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; ›	0.66	58.0	4.05e-01	100.0%	84.5%
3rc3A05	1.20.58.1080	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.65	52.0	4.92e-01	91.7%	71.7%
1uurA01	1.20.58.240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1	0.65	55.0	5.31e-01	94.8%	99.1%
3nbxX03	1.20.58.1510	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.65	51.0	5.04e-01	84.4%	89.1%
7csoA01	1.20.900.10	Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain	0.62	53.0	4.13e-01	95.8%	65.5%
1fpoC02	1.20.1280.20	Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain	0.62	49.0	5.01e-01	95.8%	91.2%
1kpgD00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.61	52.0	3.75e-01	94.8%	93.3%
4qndA00	1.20.1280.290	Mainly Alpha › Up-down Bundle › Monooxygenase ›	0.61	49.0	4.89e-01	89.6%	86.6%
3u64A00	1.25.40.920	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TRAP transporter T-component	0.61	50.0	3.59e-01	88.5%	68.3%
5bqnA02	1.20.1120.10	Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain"	0.61	51.0	3.50e-01	94.8%	54.3%
2r17C00	1.25.40.660	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein 35, helical subcomplex Vps35-C	0.60	48.0	3.46e-01	88.5%	38.9%
1urvA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.55	47.0	4.14e-01	99.0%	91.6%
1cqxA01	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.53	45.0	3.99e-01	100.0%	90.0%

ECOD (37)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3736053	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.77	64.0	6.47e-01	91.7%	89.5%
3580347	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.75	62.0	6.01e-01	89.6%	96.2%
3378097	604.1.1.110 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › WIT1_2_N	0.74	63.0	5.84e-01	92.7%	97.5%
4983442	604.5.1.2 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU	0.73	60.0	6.05e-01	87.5%	98.9%
4863092	150.3.1.28 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › GCSF	0.73	64.0	6.03e-01	95.8%	84.2%
3936715	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.73	65.0	5.77e-01	99.0%	82.6%
3606004	622.4.1.62 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › SUV3_C	0.72	56.0	6.14e-01	91.7%	100.0%
3807392	626.1.1.1 ↗	alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2	0.72	63.0	4.04e-01	95.8%	64.0%
3931593	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.70	55.0	5.91e-01	92.7%	100.0%
4975983	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.70	61.0	5.31e-01	95.8%	94.5%
4412725	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.70	55.0	4.40e-01	88.5%	42.6%
4467738	622.1.1.1 ↗	alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C	0.70	52.0	5.40e-01	78.1%	90.0%
3405706	174.1.1.1 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin	0.70	62.0	5.65e-01	100.0%	80.8%
5005480	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.70	61.0	5.02e-01	96.9%	81.1%
4526671	604.5.1.0 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895)	0.70	61.0	4.53e-01	96.9%	58.0%
3940793	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.70	59.0	5.63e-01	94.8%	95.7%
3879382	515.1.1.1 ↗	alpha arrays › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › STAT_int	0.68	48.0	4.29e-01	78.1%	53.1%
3254975	603.2.1.2 ↗	alpha bundles › STAT-like › STAT › STAT › Dict-STAT-coil	0.68	60.0	5.64e-01	96.9%	93.9%
3498899	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.68	60.0	5.41e-01	99.0%	80.0%
3743298	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.68	58.0	4.93e-01	90.6%	68.0%
3408380	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.68	59.0	5.83e-01	94.8%	99.0%
3826	604.5.1.2 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU	0.68	55.0	5.53e-01	89.6%	99.0%
4459896	622.4.1.1 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5	0.67	59.0	5.59e-01	97.9%	100.0%
3259409	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.67	54.0	4.77e-01	100.0%	59.3%
3699782	604.6.1.0 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain	0.67	56.0	5.57e-01	92.7%	100.0%
3236284	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.67	51.0	5.44e-01	82.3%	100.0%
5065235	101.1.2.738 ↗	alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C	0.67	60.0	4.82e-01	99.0%	93.0%
3732397	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.65	44.0	4.16e-01	70.8%	99.2%
3884349	601.7.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain	0.64	55.0	5.06e-01	94.8%	83.2%
3592972	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.63	49.0	3.91e-01	83.3%	77.9%
3717330	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.61	55.0	3.53e-01	100.0%	31.6%
3624258	109.4.1.1808 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd3, PF30235	0.60	54.0	3.05e-01	95.8%	11.8%
3993699	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.59	50.0	4.66e-01	93.8%	85.8%
3780808	174.1.1.1 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin	0.59	51.0	4.82e-01	100.0%	79.7%
3862034	6155.1.1.0 ↗	alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter	0.59	47.0	4.96e-01	95.8%	100.0%
3843998	174.1.1.25 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Mtp	0.55	50.0	4.34e-01	100.0%	85.5%
3929200	3567.1.1.0 ↗	a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer	0.53	45.0	4.00e-01	100.0%	71.0%