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OR354822.1__WNM50980.1__Alsa3_CDS0111__00111

Bact-Vir

OR354822.1__WNM50980.1__Alsa3_CDS0111__00111

Identity

Accession:
OR354822 ↗
Kingdom:
phage

Quality

83.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Staphylococcus_phage_Alsa_3

TaxID: 3076563

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-94
PDB
Domain cluster: rep: OL436245.1__UGL60475.1__X__00028__D2-79
D2 high residues 147-260
PDB
Domain cluster: rep: NC_071136.1__YP_010684151.1__PQZ63_gp08__00008__D413-534
D3 high residues 357-464
PDB
Domain cluster: rep: NC_071136.1__YP_010684151.1__PQZ63_gp08__00008__D413-534
D4 high residues 552-640
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 44.0 4.46e-01 74.2% 62.2%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.70 44.0 4.36e-01 74.2% 60.2%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 43.0 4.70e-01 75.3% 81.7%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.65 47.0 4.72e-01 74.2% 87.6%
2ztnA02 2.40.30.190 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 46.0 3.98e-01 79.8% 78.7%
1a3wB03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.61 46.0 4.51e-01 79.8% 81.4%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 43.0 3.47e-01 74.2% 99.4%
3gg8C03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.60 45.0 4.44e-01 80.9% 80.4%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.59 45.0 4.49e-01 80.9% 79.8%
2dy3D01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.59 46.0 4.21e-01 86.5% 71.5%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 47.0 4.58e-01 93.3% 91.3%
1i8dC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 42.0 4.23e-01 80.9% 79.5%
1ed7A00 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.56 26.0 3.39e-01 89.9% 82.2%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 42.0 4.17e-01 80.9% 76.6%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.17e-01 77.5% 96.4%
4k22A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.54 46.0 4.31e-01 93.3% 77.8%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 43.0 4.34e-01 91.0% 93.5%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 38.0 3.73e-01 85.4% 68.3%
4k2xB02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 40.0 4.15e-01 92.1% 91.5%
2qa1A02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 4.04e-01 94.4% 92.4%
4odbA00 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.51 39.0 3.29e-01 84.3% 80.9%
3hurA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.51 39.0 3.27e-01 83.1% 54.7%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.50 35.0 3.76e-01 73.0% 85.3%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 35.0 3.29e-01 71.9% 79.1%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1685099 1.1.7.51 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NeqB_N 0.75 44.0 5.29e-01 75.3% 88.1%
2448699 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 46.0 5.18e-01 75.3% 83.8%
4273414 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 44.0 4.95e-01 74.2% 80.0%
4038642 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 44.0 4.92e-01 74.2% 80.0%
4854958 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 45.0 4.38e-01 75.3% 59.4%
3973553 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 45.0 4.98e-01 74.2% 81.4%
2814716 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 45.0 4.40e-01 75.3% 60.0%
4316004 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 46.0 4.69e-01 75.3% 68.2%
4163711 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 43.0 4.38e-01 71.9% 63.5%
4512995 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 44.0 4.95e-01 74.2% 81.4%
4281020 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 44.0 4.36e-01 74.2% 60.0%
4111597 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 43.0 4.95e-01 73.0% 84.6%
4087314 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 43.0 4.55e-01 75.3% 68.8%
4184958 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 43.0 4.43e-01 75.3% 64.7%
3199895 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 45.0 4.43e-01 75.3% 61.1%
4128405 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 44.0 4.93e-01 74.2% 81.4%
4047241 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 44.0 4.30e-01 74.2% 58.9%
3975132 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 45.0 4.49e-01 75.3% 64.4%
3292420 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.69 45.0 4.48e-01 75.3% 64.4%
4204303 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 43.0 4.38e-01 74.2% 63.3%
4526316 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.69 44.0 4.35e-01 75.3% 61.1%
4880414 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.69 44.0 4.93e-01 75.3% 84.1%
4338601 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.68 45.0 4.49e-01 74.2% 65.6%
4407497 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.68 42.0 4.82e-01 75.3% 86.2%
5051090 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 44.0 4.63e-01 74.2% 73.8%
3204011 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 43.0 4.34e-01 75.3% 64.4%
3975044 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 45.0 4.88e-01 75.3% 81.3%
4880433 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 43.0 4.76e-01 75.3% 82.9%
4943228 1.1.7.146 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_Xtn 0.67 41.0 4.71e-01 71.9% 84.6%
5078547 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 43.0 4.22e-01 75.3% 61.1%
4245518 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.65 43.0 4.67e-01 75.3% 80.0%
4403870 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 44.0 4.33e-01 75.3% 65.3%
4883589 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 42.0 4.15e-01 75.3% 62.5%
3263990 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 45.0 4.74e-01 87.6% 82.5%
3388311 1.1.7.100 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N 0.64 45.0 4.63e-01 73.0% 88.2%
3251646 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.63 46.0 4.80e-01 91.0% 85.0%
4402716 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 36.0 3.75e-01 73.0% 58.8%
1758803 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.63 43.0 4.93e-01 79.8% 98.4%
4932128 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.63 46.0 4.76e-01 78.7% 81.2%
4468653 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.62 47.0 4.65e-01 79.8% 81.1%
5057245 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.62 48.0 4.80e-01 80.9% 80.0%
5050004 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.62 43.0 4.34e-01 71.9% 78.9%
4272870 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.62 46.0 4.57e-01 79.8% 82.1%
5064404 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 39.0 4.59e-01 74.2% 95.0%
4944119 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.61 46.0 4.57e-01 79.8% 82.1%
4192745 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.61 46.0 4.56e-01 79.8% 81.1%
3332717 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.61 47.0 4.47e-01 80.9% 80.0%
3415703 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.61 46.0 4.51e-01 78.7% 81.1%
3829837 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.61 46.0 4.26e-01 79.8% 79.1%
4337888 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.60 45.0 4.40e-01 79.8% 77.0%
3386080 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.60 45.0 4.40e-01 79.8% 82.0%
3310664 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.60 46.0 4.55e-01 80.9% 80.0%
3967745 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.60 35.0 3.79e-01 70.8% 68.0%
4972564 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.60 46.0 4.54e-01 80.9% 81.1%
3596767 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.60 46.0 4.41e-01 80.9% 81.0%
4994399 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.60 46.0 4.50e-01 80.9% 81.1%
3880866 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.60 45.0 4.25e-01 79.8% 76.2%
4984743 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.59 44.0 4.36e-01 79.8% 82.1%
3275452 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.35e-01 92.1% 70.0%
5016579 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.57 45.0 4.75e-01 87.6% 97.5%
4162532 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 38.0 4.01e-01 76.4% 81.3%
3481480 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.56 42.0 4.08e-01 79.8% 80.0%
1759629 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.55 38.0 3.61e-01 70.8% 72.9%
4945827 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.55 46.0 4.61e-01 92.1% 95.6%
4952455 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.55 45.0 4.56e-01 91.0% 95.5%
3614653 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 37.0 2.33e-01 70.8% 22.6%
4382401 1.1.7.100 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N 0.54 39.0 3.97e-01 75.3% 88.2%
4230122 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 32.0 3.17e-01 75.3% 52.0%
3960335 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.53 35.0 3.93e-01 83.1% 87.1%
4011873 244.1.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.52 44.0 4.32e-01 94.4% 92.6%
3649175 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 47.0 3.09e-01 100.0% 70.7%
D5 high residues 875-942
PDB
Domain cluster: rep: OR354823.1__WNM51236.1__Alsa4_CDS0106__00105__D414-479
D6 medium residues 471-539
PDB
Domain cluster: rep: OR354823.1__WNM51236.1__Alsa4_CDS0106__00105__D12-72
D7 medium residues 643-672_694-725_849-869
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.84 56.0 4.47e-01 95.2% 36.5%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.80 56.0 4.66e-01 94.0% 43.8%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 44.0 4.04e-01 83.1% 48.1%
4mmhA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 62.0 4.22e-01 98.8% 50.5%
3imhA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.67 61.0 4.00e-01 98.8% 66.6%
5jmfA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.67 62.0 4.22e-01 100.0% 51.7%
4fnvA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 61.0 4.13e-01 100.0% 50.7%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.66 59.0 4.28e-01 96.4% 37.6%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 57.0 4.63e-01 92.8% 60.1%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.66 53.0 3.83e-01 86.7% 100.0%
4ge1C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 47.0 3.49e-01 73.5% 33.7%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 59.0 3.88e-01 98.8% 68.7%
3q1nA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 57.0 3.84e-01 96.4% 73.1%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 39.0 3.46e-01 85.5% 42.5%
3ir3A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 45.0 3.88e-01 73.5% 95.2%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.63 44.0 3.01e-01 73.5% 50.2%
3uoaB02 2.60.40.3360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 46.0 3.91e-01 77.1% 71.3%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 45.0 3.79e-01 96.4% 43.8%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 49.0 3.96e-01 94.0% 43.5%
3dcdA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 54.0 3.64e-01 95.2% 70.9%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.62 50.0 4.36e-01 86.7% 62.6%
3h4zB03 3.15.10.50 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › 0.61 51.0 3.92e-01 92.8% 67.0%
4r1kB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 4.09e-01 89.2% 52.9%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 41.0 2.87e-01 72.3% 49.3%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 3.95e-01 97.6% 51.8%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.58 51.0 3.75e-01 100.0% 37.8%
3dukA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.38e-01 72.3% 85.6%
3gekA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 46.0 4.03e-01 94.0% 90.8%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 45.0 3.66e-01 100.0% 46.9%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 48.0 4.13e-01 94.0% 84.7%
3rqbA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.54 47.0 3.27e-01 94.0% 42.8%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 47.0 4.48e-01 100.0% 99.0%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 38.0 3.36e-01 74.7% 87.1%
4ae8D00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 45.0 3.63e-01 95.2% 80.0%
3d6xB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 45.0 3.76e-01 94.0% 82.9%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 3.63e-01 94.0% 61.9%
5nj5A01 3.30.2290.10 Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily 0.52 45.0 3.23e-01 95.2% 66.1%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 42.0 2.98e-01 88.0% 79.6%
4mbrA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 3.48e-01 94.0% 77.1%
3s4kA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 43.0 3.80e-01 94.0% 87.9%
2uvaG08 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 40.0 2.75e-01 85.5% 44.7%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.51 41.0 3.51e-01 89.2% 90.6%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 43.0 3.64e-01 92.8% 80.9%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 44.0 3.90e-01 95.2% 98.3%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3581297 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.81 58.0 4.19e-01 96.4% 28.8%
4470525 331.3.1.20 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.78 56.0 3.91e-01 96.4% 25.3%
4629131 9.29.1.1 ↗ beta barrels › Lipocalins/Streptavidin › VirK › VirK › VirK 0.73 56.0 4.85e-01 92.8% 54.5%
5048322 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.69 64.0 4.78e-01 98.8% 89.2%
3593405 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.68 49.0 3.85e-01 92.8% 37.1%
3417002 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 54.0 4.76e-01 94.0% 59.2%
4258822 12.3.1.61 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF25837 0.67 60.0 4.36e-01 97.6% 76.8%
3965735 274.1.1.5 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.67 48.0 4.77e-01 91.6% 72.9%
3600112 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.67 58.0 4.17e-01 95.2% 44.3%
2584123 331.3.1.19 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.66 59.0 4.15e-01 96.4% 34.5%
5079755 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.65 42.0 5.06e-01 80.7% 100.0%
3061502 10.1.1.51 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › M2AP_beta_dom 0.64 51.0 4.00e-01 85.5% 75.1%
3193851 3561.1.1.1 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 0.63 55.0 3.37e-01 94.0% 20.7%
5009702 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.63 53.0 4.36e-01 89.2% 54.3%
5051273 12.3.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.62 56.0 3.93e-01 97.6% 56.8%
5000165 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.62 54.0 3.57e-01 95.2% 68.6%
3668772 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.61 43.0 3.42e-01 73.5% 57.1%
3437088 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 53.0 4.01e-01 97.6% 45.1%
3360680 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.59 48.0 3.18e-01 89.2% 95.1%
3783000 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 47.0 4.56e-01 91.6% 75.8%
3654742 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.57 50.0 4.12e-01 94.0% 76.2%
3792813 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.56 50.0 4.08e-01 95.2% 76.4%
3919600 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 43.0 2.76e-01 83.1% 71.7%
3331221 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.56 49.0 3.96e-01 94.0% 71.3%
3684172 5.1.5.45 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN 0.55 46.0 3.05e-01 94.0% 93.4%
4978680 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.55 48.0 3.35e-01 95.2% 77.3%
3247524 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.55 48.0 3.88e-01 95.2% 70.3%
4990961 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 37.0 3.57e-01 72.3% 60.0%
4451874 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.55 47.0 3.61e-01 94.0% 65.4%
3287312 222.1.1.15 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.54 47.0 3.73e-01 92.8% 71.1%
4189396 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.54 49.0 3.96e-01 100.0% 84.4%
4093456 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.54 46.0 3.55e-01 94.0% 62.2%
4028798 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.53 45.0 3.64e-01 95.2% 58.2%
6388 243.1.1.22 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Lumazine_bd_2 0.53 38.0 3.36e-01 74.7% 87.1%
3984778 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.52 46.0 3.33e-01 97.6% 56.1%
D8 medium residues 726-848
PDB
Domain cluster: rep: OR354823.1__WNM51236.1__Alsa4_CDS0106__00105__D283-383