Back to structures

OR354823.1__WNM51137.1__Alsa4_CDS0007__00006

Bact-Vir

OR354823.1__WNM51137.1__Alsa4_CDS0007__00006

Identity

Accession:
OR354823 ↗
Kingdom:
phage

Quality

84.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 55-166
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16075.11 best DUF4815 106.3 1.90e-30 100.0% 20.2%
D2 high residues 189-242_406-459
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF16075.11 best DUF4815 36.3 3.20e-09 51.8% 8.8%
PF16075.11 DUF4815 45.4 5.50e-12 50.9% 9.1%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 4.30e-01 88.0% 100.0%
1yuzA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.50 20.0 2.79e-01 80.6% 84.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038875 4166.1.1.0 beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like 0.86 78.0 7.62e-01 100.0% 88.7%
3589732 4166.1.1.2 beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N 0.70 66.0 5.74e-01 100.0% 78.1%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 25.0 3.09e-01 91.7% 58.5%
3797626 74.1.1.0 beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.58 27.0 3.64e-01 88.9% 87.0%
3271752 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 42.0 4.70e-01 91.7% 98.8%
4028824 74.1.1.0 beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.54 27.0 3.47e-01 88.0% 90.7%
2321850 11.1.1.245 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 0.53 38.0 4.24e-01 95.4% 100.0%
3751871 11.1.1.601 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_PTPRU 0.51 43.0 4.01e-01 90.7% 98.5%
D3 high residues 244-401
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16075.11 best DUF4815 131.3 5.00e-38 100.0% 24.2%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oezA01 2.60.440.10 Mainly Beta › Sandwich › YacF-like › YacF-like domains 0.64 30.0 4.05e-01 96.8% 85.9%
1hcfX00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 32.0 3.83e-01 100.0% 80.2%
4hsqA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 40.0 4.23e-01 70.9% 93.8%
4wz9A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.58 48.0 4.33e-01 88.6% 77.6%
1xzwA01 2.60.40.380 Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal 0.55 30.0 3.72e-01 93.7% 84.7%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.55 44.0 3.98e-01 86.1% 73.5%
4fkeA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.55 44.0 3.99e-01 86.7% 77.7%
3qnfC01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.53 43.0 3.99e-01 86.7% 78.5%
2ccvA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 32.0 3.96e-01 100.0% 97.0%
1c7sA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 32.0 3.38e-01 70.3% 66.2%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.53 34.0 3.66e-01 100.0% 76.9%
1n08A00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.52 33.0 3.38e-01 99.4% 64.3%
8begA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 37.0 3.73e-01 72.8% 90.1%
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.51 36.0 4.14e-01 100.0% 98.2%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.51 27.0 3.20e-01 99.4% 71.2%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 29.0 3.57e-01 71.5% 89.8%
3wmqA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 30.0 3.74e-01 94.9% 98.9%
6ea2A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.50 40.0 3.78e-01 83.5% 80.7%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943639 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 35.0 4.68e-01 73.4% 97.6%
3277382 11.1.1.802 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.61 32.0 4.08e-01 71.5% 87.8%
3235756 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.59 47.0 4.25e-01 84.8% 74.0%
5043829 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.58 40.0 4.04e-01 88.0% 70.3%
3399218 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.58 47.0 4.28e-01 86.7% 78.6%
3392702 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.57 47.0 4.25e-01 87.3% 69.3%
3568250 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.57 47.0 4.17e-01 89.2% 74.5%
3408808 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.57 46.0 4.18e-01 86.7% 76.4%
3402496 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.57 47.0 4.16e-01 87.3% 75.1%
4546062 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.56 46.0 4.08e-01 86.7% 75.6%
4963502 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 42.0 4.59e-01 78.5% 92.6%
1108154 12.1.1.41 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF5605 0.56 32.0 3.82e-01 98.7% 82.4%
2866934 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.56 30.0 3.76e-01 70.9% 87.1%
3397743 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.56 46.0 4.08e-01 86.7% 74.5%
3923531 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 45.0 4.07e-01 87.3% 71.8%
3880041 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 46.0 4.05e-01 88.6% 76.1%
3869023 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 44.0 3.99e-01 84.8% 71.6%
3668360 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.55 33.0 3.53e-01 99.4% 67.4%
3699284 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 44.0 3.84e-01 84.8% 68.3%
3936582 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 44.0 4.00e-01 86.1% 77.7%
3860841 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 44.0 3.89e-01 84.8% 74.3%
3230817 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 45.0 4.08e-01 87.3% 81.4%
3524352 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 44.0 4.04e-01 86.1% 67.1%
3225094 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 44.0 3.92e-01 86.1% 65.2%
4856461 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.55 44.0 3.98e-01 86.7% 77.9%
3402927 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 45.0 4.13e-01 88.6% 81.0%
3933470 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 44.0 3.99e-01 86.1% 66.5%
2814163 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 44.0 3.93e-01 86.1% 65.0%
3512122 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 43.0 4.11e-01 84.8% 74.6%
3509982 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 44.0 4.19e-01 86.1% 79.5%
3558379 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.54 44.0 3.95e-01 87.3% 75.5%
5017052 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.54 37.0 3.64e-01 86.7% 64.0%
3274387 11.1.5.62 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM49 0.53 29.0 3.40e-01 85.4% 73.6%
3797565 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.53 42.0 3.83e-01 84.8% 69.1%
4471982 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.53 43.0 3.84e-01 86.7% 76.5%
3520927 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.53 43.0 3.89e-01 86.7% 78.6%
1296148 10.32.1.65 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Lectin_like 0.53 33.0 3.18e-01 77.2% 53.1%
5028923 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.53 39.0 3.55e-01 86.1% 55.9%
3238181 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.52 42.0 3.82e-01 86.7% 78.1%
3925833 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.52 40.0 3.68e-01 82.9% 82.8%
5031981 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.52 38.0 3.71e-01 88.0% 69.1%
3418365 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.51 41.0 3.09e-01 86.7% 80.0%
3249968 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.51 33.0 3.20e-01 97.5% 55.7%
3616755 11.1.1.818 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TPPC8_2nd 0.51 31.0 2.99e-01 79.7% 51.1%
3491854 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.51 40.0 3.78e-01 86.1% 68.2%
4944486 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.51 37.0 3.51e-01 87.3% 63.2%