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OR354837.1__WNM53742.1__CoNPh14_CDS0061__00061

Bact-Vir

OR354837.1__WNM53742.1__CoNPh14_CDS0061__00061

Identity

Accession:
OR354837 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sextaecvirus› Staphylococcus_phage_S-CoN_Ph14

TaxID: 3076570

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-55_91-117
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f2bA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.71 65.0 4.54e-01 100.0% 46.6%
1itcA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 55.0 3.57e-01 100.0% 35.3%
5itwA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 54.0 3.94e-01 100.0% 64.7%
6ia6A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 53.0 3.71e-01 95.1% 49.4%
3q3vA01 3.40.50.1260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain 0.59 51.0 4.07e-01 98.8% 76.7%
3k1zA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.59 47.0 3.88e-01 89.0% 59.0%
4htyA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 51.0 3.45e-01 100.0% 59.7%
4e0aA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 47.0 3.93e-01 93.9% 62.8%
4ry9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 36.0 2.91e-01 73.2% 31.5%
2obbA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 49.0 4.33e-01 96.3% 66.1%
3u7eB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 46.0 3.53e-01 90.2% 55.6%
1n3lA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 49.0 3.70e-01 98.8% 80.9%
1j09A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 46.0 4.05e-01 89.0% 68.6%
1l8lA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 48.0 3.97e-01 100.0% 61.6%
3obwA03 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.56 32.0 3.05e-01 70.7% 44.1%
3tnjA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 49.0 4.34e-01 98.8% 73.6%
2ajtA01 3.40.50.10940 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 47.0 3.77e-01 100.0% 45.7%
1iv0A00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.55 42.0 4.03e-01 82.9% 91.8%
3df7A01 3.40.50.11770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 42.0 4.02e-01 91.5% 70.4%
6n2aB02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.55 45.0 3.34e-01 93.9% 39.5%
3pnuA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.54 46.0 3.17e-01 100.0% 50.9%
2afcA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.54 46.0 3.79e-01 95.1% 56.9%
2gmwA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 43.0 3.41e-01 90.2% 65.9%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 43.0 3.49e-01 90.2% 97.6%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 47.0 3.50e-01 100.0% 50.7%
2y6pB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 42.0 3.11e-01 89.0% 36.5%
2hxsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.58e-01 100.0% 52.2%
3lwsA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 43.0 3.16e-01 96.3% 56.2%
2xryA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 42.0 3.54e-01 100.0% 50.7%
3m3pA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.51 44.0 3.20e-01 98.8% 93.6%
1vhxB00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.51 41.0 3.53e-01 90.2% 100.0%
2fp3A01 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 3.28e-01 100.0% 68.7%
2o2xA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 43.0 3.35e-01 98.8% 91.2%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 3.16e-01 92.7% 83.2%
1pyoC00 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 40.0 3.33e-01 89.0% 74.5%
3t8iA00 3.90.245.10 Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like 0.51 41.0 2.90e-01 93.9% 59.8%
1lbqA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 42.0 3.68e-01 100.0% 88.5%
2o3rA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 41.0 3.65e-01 92.7% 83.9%
4g0mA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 39.0 3.45e-01 89.0% 79.3%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3929132 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 51.0 4.16e-01 100.0% 42.7%
3300451 2006.1.1.52 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PF28688 0.62 52.0 4.27e-01 93.9% 56.8%
3928227 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.61 48.0 4.45e-01 100.0% 65.5%
3038798 2002.1.1.91 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dehydratase_LU 0.59 51.0 3.16e-01 100.0% 28.2%
5062604 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.59 46.0 3.69e-01 87.8% 42.4%
4936441 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.58 49.0 4.11e-01 95.1% 55.2%
4946702 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 50.0 3.41e-01 100.0% 63.3%
4969771 2007.1.11.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains 0.58 46.0 3.85e-01 100.0% 47.7%
5051548 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.57 50.0 3.37e-01 100.0% 40.9%
4125235 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.57 49.0 3.44e-01 100.0% 30.5%
5041762 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.57 46.0 3.74e-01 90.2% 74.5%
4387154 2007.1.4.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.57 46.0 3.80e-01 91.5% 61.4%
3920532 2006.1.1.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.56 49.0 3.58e-01 100.0% 44.3%
3286677 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 45.0 3.71e-01 89.0% 51.3%
4932351 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.55 46.0 3.26e-01 96.3% 51.2%
5053929 7512.1.1.24 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 0.55 44.0 3.26e-01 90.2% 99.2%
4981908 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.55 48.0 3.19e-01 100.0% 37.3%
3378801 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.55 42.0 4.18e-01 100.0% 78.9%
5050089 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 46.0 3.32e-01 98.8% 97.1%
3960263 2007.1.20.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › ILVD_EDD 0.55 44.0 3.65e-01 91.5% 76.6%
3952574 2004.1.1.202 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 0.54 42.0 3.37e-01 100.0% 40.6%
4002667 2006.1.6.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.54 47.0 3.53e-01 100.0% 40.0%
3382359 300.1.1.16 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.54 42.0 2.84e-01 86.6% 60.6%
5002324 7512.1.1.2 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Phosphorylase 0.54 44.0 3.04e-01 90.2% 54.5%
3273535 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.54 47.0 3.60e-01 100.0% 54.5%
3235620 300.1.1.11 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.54 46.0 3.60e-01 100.0% 79.3%
5057195 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 45.0 3.21e-01 98.8% 97.6%
3401572 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.54 40.0 3.18e-01 100.0% 36.2%
3992365 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.54 45.0 2.84e-01 98.8% 16.9%
5014761 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.53 46.0 3.82e-01 98.8% 97.4%
5042343 2003.1.6.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.53 43.0 3.42e-01 93.9% 86.7%
3689453 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 46.0 3.74e-01 100.0% 60.6%
3291202 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 44.0 3.37e-01 92.7% 91.0%
3440155 2003.1.5.121 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1442 0.53 46.0 3.45e-01 98.8% 40.5%
3433223 2004.1.1.189 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.53 41.0 3.19e-01 91.5% 36.4%
4028944 2006.1.4.11 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PRORP 0.52 40.0 3.43e-01 85.4% 51.0%
4931921 7510.1.1.0 ↗ a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.52 44.0 3.76e-01 95.1% 71.4%
4128951 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.52 45.0 3.13e-01 98.8% 52.7%
5063486 2003.1.10.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.52 37.0 3.32e-01 90.2% 52.2%
3987964 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 39.0 3.73e-01 96.3% 67.0%
3780531 300.1.1.1 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc 0.52 46.0 3.43e-01 100.0% 82.3%
3659658 2006.1.1.3 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.51 44.0 4.16e-01 100.0% 91.4%
4983383 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.51 45.0 3.74e-01 98.8% 87.2%
5078948 2005.1.1.29 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g 0.51 41.0 3.07e-01 90.2% 97.4%
3438965 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.51 41.0 3.86e-01 93.9% 73.0%
3928086 2006.1.6.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.51 43.0 3.35e-01 100.0% 41.4%
3667975 300.1.1.16 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 0.51 40.0 3.14e-01 89.0% 53.6%
3284433 2007.1.19.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin 0.51 41.0 2.91e-01 95.1% 99.4%
4659593 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.50 44.0 3.74e-01 100.0% 64.7%
D2 high residues 152-293
PDB
Domain cluster: rep: OQ326496.2__WDQ45493.1__X__00095__D315-465
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07733.19 best DNA_pol3_alpha 94.1 1.60e-26 95.8% 41.9%
D3 high residues 309-368
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hpiA03 1.10.10.1600 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain 0.88 65.0 6.16e-01 100.0% 66.2%
2hnhA03 1.10.10.1600 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain 0.77 60.0 5.54e-01 100.0% 65.4%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.77 43.0 4.94e-01 76.7% 75.6%
1ss3A00 1.10.287.720 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Pollen allergen ole e 6 0.72 40.0 4.30e-01 88.3% 64.0%
2pmzF02 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.72 41.0 4.86e-01 96.7% 87.2%
3f2bA07 6.10.140.1510 Special › Helix non-globular › Helix Hairpins › 0.72 45.0 3.97e-01 100.0% 44.2%
3ie7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.66 50.0 3.11e-01 96.7% 15.5%
3umoA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.65 50.0 3.12e-01 95.0% 15.9%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.65 50.0 4.74e-01 100.0% 71.8%
1z2iA01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.64 48.0 4.11e-01 100.0% 51.6%
2abqA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 47.0 2.94e-01 95.0% 15.4%
3c1dB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 38.0 3.80e-01 85.0% 56.5%
3kzhB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.63 47.0 2.99e-01 95.0% 15.6%
1dv0A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.61 39.0 4.30e-01 100.0% 86.7%
4h8aB01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.60 45.0 4.51e-01 100.0% 80.0%
3ibyD02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 47.0 4.27e-01 90.0% 73.8%
2i7aA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 45.0 3.38e-01 100.0% 33.1%
2dkzA01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.58 45.0 4.48e-01 100.0% 83.6%
1yqgA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.55 42.0 3.36e-01 85.0% 42.5%
3kp1E02 1.10.8.1000 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ornithine 4,5 aminomutase S component, alpha subunit-like 0.55 46.0 4.34e-01 100.0% 77.1%
3sk9A00 1.10.3210.30 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.55 43.0 2.97e-01 88.3% 83.9%
2l4eA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.55 36.0 3.66e-01 100.0% 70.2%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.55 43.0 4.23e-01 100.0% 80.6%
2bzbA00 4.10.280.10 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain 0.54 36.0 3.66e-01 83.3% 66.1%
3ci0K02 1.10.40.60 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › EpsJ-like 0.53 46.0 3.77e-01 100.0% 70.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1117589 316.1.1.17 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha 0.88 65.0 4.01e-01 100.0% 14.9%
4826122 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.73 46.0 3.54e-01 91.7% 29.5%
3984781 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.70 45.0 3.28e-01 91.7% 24.4%
3825236 7579.1.1.92 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 0.70 51.0 3.17e-01 100.0% 15.1%
3643161 7579.1.1.44 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.70 51.0 3.11e-01 100.0% 13.8%
3988185 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 43.0 5.02e-01 100.0% 95.0%
3490343 108.1.1.73 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.68 52.0 4.79e-01 100.0% 63.7%
4582078 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.67 50.0 5.36e-01 93.3% 96.0%
3494396 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 47.0 4.14e-01 100.0% 50.5%
3606177 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.62 42.0 2.73e-01 93.3% 14.3%
4975170 2007.13.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit 0.60 47.0 3.02e-01 85.0% 41.1%
3258710 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 39.0 4.28e-01 95.0% 91.1%
5007440 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.59 42.0 3.63e-01 75.0% 72.0%
4119310 327.10.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.56 43.0 4.10e-01 100.0% 69.3%
146380 131.1.1.14 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Cas3_HD 0.55 43.0 2.97e-01 88.3% 83.9%
2551831 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.54 47.0 4.16e-01 100.0% 70.8%
1208317 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.53 46.0 3.78e-01 100.0% 52.2%
4972302 2498.5.1.1 ↗ mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 0.53 41.0 3.98e-01 100.0% 75.7%