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OR354837.1__WNM53744.1__CoNPh14_CDS0063__00063

Bact-Vir

OR354837.1__WNM53744.1__CoNPh14_CDS0063__00063

Identity

Accession:
OR354837 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sextaecvirus› Staphylococcus_phage_S-CoN_Ph14

TaxID: 3076570

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 193-272
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qoyA00 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.60 47.0 3.20e-01 85.0% 69.6%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 4.21e-01 76.2% 85.6%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.00e-01 93.8% 61.6%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.11e-01 95.0% 65.0%
3dkwG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.24e-01 80.0% 96.3%
1t6sB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 4.16e-01 76.2% 97.4%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.07e-01 81.2% 83.3%
5b3hC01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 22.0 2.82e-01 75.0% 52.1%
3lv0A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.55 43.0 3.65e-01 86.3% 98.6%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.84e-01 82.5% 91.3%
1u8xX02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.54 40.0 2.81e-01 78.8% 34.1%
2copA00 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.54 44.0 4.05e-01 100.0% 67.9%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 37.0 3.30e-01 70.0% 88.4%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.91e-01 82.5% 88.9%
2fbkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.55e-01 92.5% 60.3%
4bzaA01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.52 30.0 3.28e-01 96.2% 67.6%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.68e-01 73.8% 100.0%
3c4nA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 44.0 3.21e-01 100.0% 45.7%
3m8uA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.50 38.0 3.06e-01 82.5% 78.7%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4979317 101.1.2.109 ↗ alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.62 48.0 4.76e-01 83.7% 94.1%
3482763 197.1.1.0 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like 0.61 42.0 3.75e-01 71.2% 74.8%
3166485 101.1.2.616 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27833 0.61 47.0 3.96e-01 85.0% 87.9%
3847882 2004.1.1.17 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.60 52.0 3.04e-01 100.0% 28.0%
1885927 101.1.2.91 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_CodY 0.57 41.0 4.18e-01 78.8% 79.5%
5022894 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.51e-01 97.5% 98.9%
4016792 101.1.2.359 ↗ alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.56 41.0 3.89e-01 81.2% 93.3%
3504673 109.4.1.469 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS15 0.56 41.0 2.72e-01 78.8% 39.9%
3885052 145.1.1.4 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › ASXH 0.56 46.0 4.38e-01 91.3% 76.8%
3683800 109.4.1.2662 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, Importin_rep_4, Importin_rep_6, HEAT_GCN1, TPR_IMB1, TPR_IPO5 0.56 43.0 2.43e-01 83.7% 17.5%
3351704 109.4.1.2950 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, Importin_rep_4, TPR_IMB1, TPR_IPO5 0.56 43.0 2.50e-01 83.7% 19.9%
3372020 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.56 38.0 3.85e-01 83.7% 72.5%
3242025 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 38.0 3.80e-01 72.5% 100.0%
4997786 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.31e-01 88.7% 100.0%
3785188 101.1.2.183 ↗ alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH 0.55 41.0 3.81e-01 81.2% 88.6%
3968802 3831.1.1.1 ↗ alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI 0.55 40.0 3.85e-01 100.0% 65.3%
4014227 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 3.36e-01 82.5% 59.4%
4977499 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 4.04e-01 96.2% 78.3%
2560464 101.1.2.60 ↗ alpha arrays › HTH › HTH › winged helix domain › HA2_N 0.54 38.0 4.07e-01 75.0% 94.1%
4100982 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.54 41.0 4.20e-01 88.7% 86.3%
4364892 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.53 38.0 2.73e-01 77.5% 63.6%
3403757 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.53 40.0 2.53e-01 100.0% 15.5%
3193215 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.93e-01 82.5% 94.1%
5036858 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.53 37.0 4.17e-01 100.0% 100.0%
4934939 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 3.76e-01 86.3% 85.5%
4310372 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.53 44.0 3.50e-01 98.8% 93.5%
4946594 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.69e-01 81.2% 71.0%
3610601 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.52 44.0 3.33e-01 100.0% 94.2%
4955406 101.1.2.181 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.52 39.0 4.01e-01 81.2% 92.4%
4494252 304.7.1.2 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.52 33.0 3.13e-01 82.5% 50.0%
3344993 109.4.1.2176 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, Importin_rep_4, Importin_rep_6, TPR_IMB1, TPR_IPO5 0.52 44.0 2.51e-01 95.0% 67.3%
5062173 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 3.27e-01 72.5% 53.0%
3713916 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 3.62e-01 81.2% 97.0%
4927427 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 4.29e-01 98.8% 100.0%
2923620 601.55.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 0.51 41.0 3.50e-01 87.5% 53.9%
3824428 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.51 37.0 3.31e-01 81.2% 56.2%
4190838 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.51 32.0 3.07e-01 93.8% 51.0%
5056734 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.79e-01 95.0% 80.9%
5049455 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.51 43.0 3.69e-01 100.0% 63.6%
3595242 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.80e-01 82.5% 96.2%
3454929 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.50 37.0 3.16e-01 80.0% 67.6%
1873725 230.4.1.1 ↗ a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE 0.50 42.0 3.31e-01 100.0% 85.9%
D2 high residues 312-444
PDB
Domain cluster: rep: NC_047931.1__YP_009798743.1__HOS85_gp073__00073__D687-830
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f8tA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 49.0 6.32e-01 85.0% 98.8%
1quqB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 52.0 5.60e-01 87.2% 75.4%
8aasC01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.81 50.0 5.70e-01 86.5% 81.4%
4gnxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 49.0 5.45e-01 85.7% 76.9%
1wydA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 54.0 6.11e-01 84.2% 95.1%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 40.0 5.08e-01 82.7% 87.3%
3tdqA00 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.75 44.0 5.47e-01 80.5% 91.9%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 53.0 6.07e-01 82.7% 95.1%
3q8dA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 42.0 5.43e-01 80.5% 97.4%
2kctA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 43.0 5.36e-01 72.2% 90.8%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 52.0 5.56e-01 87.2% 83.1%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 37.0 4.82e-01 81.2% 90.5%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 53.0 5.61e-01 87.2% 85.8%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 39.0 5.11e-01 88.0% 98.6%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 41.0 5.13e-01 88.7% 95.0%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 52.0 5.87e-01 83.5% 96.2%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 51.0 5.34e-01 88.0% 82.1%
2k52A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 39.0 5.05e-01 85.7% 100.0%
1ah9A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 37.0 4.85e-01 71.4% 98.6%
1d7qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 41.0 4.07e-01 89.5% 55.9%
1v1pB02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 38.0 4.92e-01 79.7% 100.0%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 54.0 5.37e-01 88.0% 82.4%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 54.0 5.27e-01 86.5% 78.7%
2ahoB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 40.0 4.97e-01 88.0% 100.0%
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.66 39.0 4.78e-01 78.9% 91.7%
3ntkB01 2.40.50.790 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 39.0 4.69e-01 89.5% 89.5%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 55.0 5.20e-01 87.2% 80.0%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 54.0 5.38e-01 85.7% 83.7%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 53.0 5.45e-01 87.2% 88.3%
3bzcA05 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 42.0 4.81e-01 78.2% 89.6%
3mxnB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 51.0 5.23e-01 88.0% 84.7%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 53.0 5.26e-01 88.0% 84.4%
2f4iA02 2.40.50.420 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Envelope glycoprotein gp160, DUF2291, alpha/beta domain 0.64 50.0 5.33e-01 82.0% 100.0%
3psiA06 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 41.0 4.64e-01 77.4% 86.0%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 42.0 4.72e-01 99.2% 86.5%
1jt8A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 38.0 4.29e-01 89.5% 78.4%
1l1oF01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 52.0 5.31e-01 88.7% 90.1%
3efaA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 35.0 3.42e-01 81.2% 50.7%
3amuA02 2.40.50.1010 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 52.0 5.17e-01 88.7% 92.6%
1smxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 37.0 4.48e-01 74.4% 97.7%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 49.0 4.82e-01 89.5% 85.9%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027038 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.84 51.0 5.79e-01 84.2% 78.8%
4030630 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.84 50.0 5.63e-01 83.5% 76.2%
5022914 2.1.1.121 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Mcm2-like_OB_arc 0.83 49.0 5.91e-01 83.5% 86.7%
378400 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.80 52.0 5.49e-01 87.2% 72.9%
3348753 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.79 48.0 5.37e-01 85.7% 75.9%
154170 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.78 49.0 5.38e-01 85.7% 76.9%
5029056 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.78 51.0 5.53e-01 82.7% 77.4%
3244959 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.78 42.0 5.62e-01 77.4% 100.0%
3703907 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 39.0 5.42e-01 79.7% 100.0%
3496824 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.77 49.0 5.60e-01 84.2% 85.0%
4677730 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.77 38.0 5.34e-01 74.4% 100.0%
5023276 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 48.0 5.99e-01 77.4% 100.0%
3613173 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 41.0 4.59e-01 89.5% 66.7%
4229786 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 41.0 5.45e-01 72.2% 100.0%
3386993 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.75 38.0 5.30e-01 72.2% 100.0%
4309225 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.75 38.0 5.28e-01 72.9% 100.0%
4942314 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.74 45.0 4.79e-01 89.5% 67.5%
5023761 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 39.0 5.19e-01 75.2% 97.1%
3514878 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.74 49.0 5.21e-01 87.2% 75.0%
5042620 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.73 43.0 4.72e-01 88.7% 70.0%
5016802 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 37.0 5.11e-01 83.5% 100.0%
3226474 2.1.1.253 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.73 41.0 5.36e-01 77.4% 98.7%
3236144 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 56.0 6.18e-01 89.5% 97.3%
3585484 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.73 43.0 4.90e-01 84.2% 78.0%
4952024 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 53.0 5.25e-01 89.5% 71.4%
3680255 2.1.1.67 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.72 50.0 5.58e-01 82.0% 87.2%
4343591 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.72 42.0 4.70e-01 75.9% 73.3%
3604133 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.72 55.0 5.52e-01 83.5% 78.5%
3595342 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 44.0 4.59e-01 89.5% 65.6%
4948008 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 43.0 5.14e-01 88.0% 88.9%
3201294 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.71 43.0 4.45e-01 89.5% 63.2%
5043054 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 52.0 5.99e-01 82.0% 100.0%
5067743 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 44.0 5.11e-01 88.7% 86.3%
4927618 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.71 42.0 4.90e-01 88.7% 82.1%
4024623 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.71 41.0 5.20e-01 72.9% 96.2%
3262589 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 51.0 5.35e-01 86.5% 81.7%
5015437 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 55.0 5.49e-01 83.5% 79.3%
5052784 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 39.0 5.12e-01 76.7% 98.6%
3403112 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 42.0 4.88e-01 75.9% 83.2%
4956597 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.70 58.0 5.81e-01 87.2% 88.1%
4943416 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 44.0 4.96e-01 91.0% 82.5%
4002794 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 42.0 4.99e-01 71.4% 88.9%
3963148 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 50.0 5.77e-01 78.9% 100.0%
3741315 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.69 44.0 4.87e-01 91.0% 81.0%
3255830 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.68 50.0 5.72e-01 81.2% 100.0%
3790520 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 45.0 5.22e-01 88.7% 93.7%
4932667 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 43.0 5.30e-01 79.7% 100.0%
4997292 2.1.1.109 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 0.67 43.0 5.24e-01 78.9% 100.0%
3243620 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 39.0 4.96e-01 71.4% 100.0%
4301123 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 40.0 5.01e-01 83.5% 97.5%
4050613 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 43.0 5.20e-01 78.9% 100.0%
4983129 2.1.1.109 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 0.67 43.0 5.20e-01 78.9% 100.0%
4946960 2.1.1.361 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EIF_2_alpha 0.67 41.0 5.04e-01 76.7% 100.0%
5059842 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 5.42e-01 81.2% 97.0%
3484465 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 51.0 5.62e-01 82.0% 97.3%
3737319 2.1.1.52 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.66 55.0 5.31e-01 88.0% 79.3%
24072 2.1.1.109 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 0.66 42.0 5.10e-01 79.7% 97.7%
5030089 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.66 40.0 4.96e-01 83.5% 100.0%
4157994 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.66 42.0 4.98e-01 75.2% 94.4%
3946740 2.7.1.1 ↗ beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.65 40.0 4.77e-01 82.7% 90.0%
3474782 2.1.1.67 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.65 53.0 5.32e-01 87.2% 84.4%
3899839 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.65 41.0 4.92e-01 76.7% 97.6%
None — 0.65 54.0 4.98e-01 88.7% 74.7%
4942953 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.65 41.0 4.75e-01 85.0% 89.5%
3476170 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 51.0 5.53e-01 82.7% 96.5%
3913987 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.64 41.0 4.83e-01 85.7% 91.6%
3490309 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 52.0 5.20e-01 88.0% 84.4%
4287233 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.63 40.0 4.44e-01 77.4% 78.2%
3261728 2.1.1.67 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.62 52.0 5.18e-01 87.2% 84.8%
3954619 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.61 41.0 4.56e-01 82.0% 86.7%
185055 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 52.0 4.73e-01 88.7% 81.4%
4976969 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.59 34.0 4.35e-01 72.9% 100.0%
3899838 2.1.1.226 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 0.58 41.0 4.55e-01 75.2% 91.4%
3740010 2.1.1.226 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 0.55 43.0 4.51e-01 88.7% 88.0%
4967975 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 45.0 4.59e-01 86.5% 98.5%
3925804 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.54 43.0 4.08e-01 85.7% 69.4%
3729167 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 39.0 4.47e-01 79.7% 100.0%
3944153 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.52 35.0 3.81e-01 70.7% 82.7%
D3 medium residues 31-119
PDB
Domain cluster: rep: OR354834.1__WNM53211.1__CoNPh11_CDS0154__00152__D584-660
D4 medium residues 120-190_273-311
PDB
Domain cluster: rep: OQ326496.2__WDQ45493.1__X__00095__D923-1043_1154-1184
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14579.13 best HHH_6 28.1 2.60e-06 51.8% 63.3%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1txuA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.57 37.0 3.91e-01 76.4% 74.5%
3ecsC01 1.20.120.1070 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain 0.55 42.0 4.42e-01 81.8% 94.0%
3bniB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 42.0 3.70e-01 84.5% 55.6%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.53 33.0 3.42e-01 76.4% 66.7%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.51 32.0 3.33e-01 76.4% 65.1%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.50 28.0 3.60e-01 92.7% 98.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4381449 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 30.0 3.59e-01 70.9% 84.3%
3194871 186.1.1.17 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Arb1 0.53 41.0 4.04e-01 85.5% 75.8%
3421325 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 31.0 3.51e-01 74.5% 80.0%