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OR354840.1__WNM54279.1__CoNPh17_CDS0083__00083
Bact-VirOR354840.1__WNM54279.1__CoNPh17_CDS0083__00083
Identity
- Accession:
- OR354840 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 3076573
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-52
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1txjA00 | 2.170.150.10 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A | 0.66 | 47.0 | 3.33e-01 | 77.6% | 50.3% |
| 5hxgB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.63 | 43.0 | 3.91e-01 | 71.4% | 76.9% |
| 3e3vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 36.0 | 3.51e-01 | 71.4% | 52.8% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 49.0 | 4.13e-01 | 91.8% | 73.8% |
| 2btoA03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 34.0 | 3.37e-01 | 100.0% | 50.0% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 43.0 | 3.64e-01 | 77.6% | 67.9% |
| 1eo0A00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.57 | 44.0 | 3.99e-01 | 95.9% | 79.2% |
| 4m52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 42.0 | 2.77e-01 | 83.7% | 90.1% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 43.0 | 3.82e-01 | 95.9% | 59.0% |
| 3ihvA03 | 1.25.40.900 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 42.0 | 3.15e-01 | 87.8% | 32.4% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 38.0 | 3.50e-01 | 93.9% | 71.8% |
| 6pw7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.51 | 39.0 | 3.64e-01 | 93.9% | 70.4% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 39.0 | 3.63e-01 | 89.8% | 75.0% |
| 2ja2A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.50 | 38.0 | 3.82e-01 | 98.0% | 100.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4343564 | 605.8.1.8 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Fur_reg_FbpA | 0.72 | 54.0 | 5.63e-01 | 81.6% | 88.9% |
| 3376301 | 3361.1.1.0 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 | 0.69 | 51.0 | 4.71e-01 | 81.6% | 76.9% |
| 3945211 | 101.1.13.2 ↗ | alpha arrays › HTH › HTH › Flagellar transcriptional activator FlhD › DUF2857 | 0.67 | 46.0 | 4.43e-01 | 71.4% | 85.5% |
| 4991136 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.65 | 50.0 | 4.72e-01 | 85.7% | 88.3% |
| 4651792 | 101.1.13.1 ↗ | alpha arrays › HTH › HTH › Flagellar transcriptional activator FlhD › FlhD | 0.64 | 43.0 | 3.77e-01 | 71.4% | 62.7% |
| 4855198 | 101.1.13.1 ↗ | alpha arrays › HTH › HTH › Flagellar transcriptional activator FlhD › FlhD | 0.63 | 43.0 | 3.91e-01 | 71.4% | 72.3% |
| 4057034 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.62 | 50.0 | 4.51e-01 | 98.0% | 93.3% |
| 4336243 | 3949.1.1.1 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT | 0.60 | 48.0 | 4.46e-01 | 93.9% | 75.4% |
| 3592748 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.58 | 40.0 | 3.80e-01 | 75.5% | 60.0% |
| 3779108 | 108.1.1.68 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › TPGS1_C | 0.56 | 44.0 | 3.08e-01 | 100.0% | 31.5% |
| 3205548 | 632.7.1.51 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Etd1 | 0.55 | 41.0 | 3.71e-01 | 83.7% | 95.7% |
| 4019509 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.54 | 39.0 | 3.84e-01 | 81.6% | 92.7% |
| 3732913 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.54 | 42.0 | 3.09e-01 | 100.0% | 97.1% |