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OR354849.1__WNM55099.1__CoNPh26_CDS0012__00011
Bact-VirOR354849.1__WNM55099.1__CoNPh26_CDS0012__00011
Identity
- Accession:
- OR354849 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
TaxID: 3076583
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-58
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qmgC01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 60.0 | 4.30e-01 | 98.3% | 36.5% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.64 | 47.0 | 3.73e-01 | 79.3% | 46.2% |
| 2lkoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 39.0 | 2.96e-01 | 77.6% | 26.1% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 46.0 | 3.55e-01 | 82.8% | 87.1% |
| 2e2dC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 40.0 | 3.46e-01 | 70.7% | 85.1% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 49.0 | 3.19e-01 | 98.3% | 55.2% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 49.0 | 3.35e-01 | 100.0% | 87.7% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 42.0 | 3.43e-01 | 77.6% | 72.7% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 42.0 | 3.07e-01 | 81.0% | 37.3% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.56 | 39.0 | 2.87e-01 | 75.9% | 86.2% |
| 2o8bB02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.56 | 42.0 | 3.02e-01 | 84.5% | 97.3% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 38.0 | 3.63e-01 | 74.1% | 85.1% |
| 1a6aB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.55 | 39.0 | 3.47e-01 | 75.9% | 79.8% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 38.0 | 3.55e-01 | 72.4% | 77.0% |
| 4hfsA00 | 2.60.120.1270 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.27e-01 | 100.0% | 40.4% |
| 5hc2B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 2.91e-01 | 100.0% | 70.8% |
| 5cxxB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 44.0 | 2.89e-01 | 94.8% | 85.8% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 32.0 | 3.10e-01 | 96.6% | 47.1% |
| 2gfoA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 45.0 | 2.83e-01 | 100.0% | 85.0% |
| 4lduA02 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.51 | 40.0 | 3.39e-01 | 98.3% | 50.0% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 44.0 | 2.76e-01 | 100.0% | 76.9% |
| 2uz0A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 2.76e-01 | 96.6% | 39.1% |
| 4rgyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 41.0 | 2.80e-01 | 96.6% | 39.2% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3856429 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.70 | 60.0 | 4.79e-01 | 100.0% | 46.7% |
| 3485871 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.70 | 61.0 | 4.55e-01 | 96.6% | 44.3% |
| 3930254 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.70 | 61.0 | 4.42e-01 | 96.6% | 38.7% |
| 3315173 | 243.3.1.46 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SWIM | 0.61 | 44.0 | 3.52e-01 | 75.9% | 52.2% |
| 3297271 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 38.0 | 2.50e-01 | 79.3% | 13.2% |
| 3260045 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 50.0 | 4.64e-01 | 98.3% | 78.7% |
| 4297447 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 40.0 | 3.12e-01 | 75.9% | 49.3% |
| 3235699 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 39.0 | 3.24e-01 | 72.4% | 58.3% |
| 3684759 | 331.3.1.10 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL | 0.57 | 40.0 | 2.97e-01 | 74.1% | 47.6% |
| 3751411 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.57 | 38.0 | 3.44e-01 | 74.1% | 46.7% |
| 4195041 | 4090.1.1.1 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like › YezG-like | 0.57 | 49.0 | 3.69e-01 | 100.0% | 83.3% |
| 3499841 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 39.0 | 3.48e-01 | 74.1% | 75.6% |
| 3651001 | 376.1.1.101 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PHD_Oberon | 0.56 | 45.0 | 3.25e-01 | 87.9% | 66.1% |
| 3461850 | 150.1.1.88 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PHD_Oberon | 0.56 | 44.0 | 3.23e-01 | 87.9% | 71.5% |
| 3585861 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 38.0 | 3.03e-01 | 75.9% | 50.0% |
| 135631 | 4090.1.1.1 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like › YezG-like | 0.55 | 48.0 | 3.49e-01 | 100.0% | 73.9% |
| 3607857 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 38.0 | 3.21e-01 | 72.4% | 65.0% |
| 3614906 | 4.26.1.8 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 | 0.55 | 44.0 | 4.19e-01 | 89.7% | 95.7% |
| 5036880 | 330.1.1.35 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › LeuA_dimer | 0.54 | 37.0 | 3.55e-01 | 72.4% | 95.7% |
| 4972214 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 39.0 | 2.30e-01 | 75.9% | 10.6% |
| 3816322 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.54 | 41.0 | 2.64e-01 | 86.2% | 30.4% |
| 3507295 | 304.166.1.9 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29949 | 0.54 | 43.0 | 3.83e-01 | 100.0% | 69.0% |
| 3391411 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 35.0 | 3.88e-01 | 77.6% | 97.5% |
| 3931594 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 36.0 | 3.30e-01 | 74.1% | 76.7% |
| 5045117 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 34.0 | 3.45e-01 | 86.2% | 61.7% |
| 3937984 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 36.0 | 3.20e-01 | 74.1% | 68.0% |
| 5050199 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 37.0 | 2.80e-01 | 75.9% | 49.4% |
| 4820874 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 41.0 | 3.42e-01 | 93.1% | 87.1% |
| 3317147 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 35.0 | 3.85e-01 | 89.7% | 100.0% |
| 5078978 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 40.0 | 2.70e-01 | 89.7% | 35.1% |
| 3664655 | 601.28.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › PHD_Oberon | 0.52 | 38.0 | 2.88e-01 | 81.0% | 68.7% |
| 3504365 | 633.23.1.38 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › TMEM127 | 0.51 | 38.0 | 2.71e-01 | 87.9% | 51.6% |
| None | — | 0.51 | 39.0 | 2.66e-01 | 89.7% | 34.0% | |
| 3322492 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.51 | 37.0 | 2.37e-01 | 77.6% | 24.7% |
| 4779411 | 243.3.1.6 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Monellin | 0.51 | 31.0 | 3.45e-01 | 86.2% | 79.5% |