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OR354850.1__WNM55341.1__CoNPh27_CDS0075__00075

Bact-Vir

OR354850.1__WNM55341.1__CoNPh27_CDS0075__00075

Identity

Accession:
OR354850 ↗
Kingdom:
phage

Quality

56.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-84
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lkxB00 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.65 36.0 4.31e-01 84.5% 83.3%
1tr8A01 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.61 33.0 3.99e-01 81.0% 82.7%
6r2wH02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 34.0 3.16e-01 76.2% 48.2%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.53 41.0 3.41e-01 84.5% 47.4%
1aipE03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 29.0 3.31e-01 89.3% 78.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004308 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 54.0 4.38e-01 83.3% 49.7%
5040332 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 47.0 4.22e-01 83.3% 55.7%
3590380 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 47.0 3.79e-01 95.2% 45.6%
4989078 1.1.9.23 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.51 40.0 3.53e-01 86.9% 68.0%
4156749 3234.1.1.2 a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.50 33.0 2.34e-01 83.3% 19.3%