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OR354858.1__WNM55579.1__CoNPh35_CDS0010__00009

Bact-Vir

OR354858.1__WNM55579.1__CoNPh35_CDS0010__00009

Identity

Accession:
OR354858 ↗
Kingdom:
phage

Quality

69.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-62
PDB
D2 medium residues 66-160
PDB
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.89 52.0 5.79e-01 100.0% 73.7%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 41.0 5.47e-01 100.0% 87.0%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.83 50.0 5.05e-01 100.0% 61.1%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.80 45.0 5.03e-01 96.8% 70.7%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 59.0 6.56e-01 100.0% 96.1%
3dzzA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.77 33.0 2.85e-01 94.7% 26.8%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.76 48.0 5.27e-01 100.0% 76.2%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.75 54.0 5.69e-01 98.9% 82.6%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.75 49.0 5.54e-01 100.0% 88.7%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 42.0 4.37e-01 100.0% 62.8%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 47.0 5.25e-01 100.0% 89.0%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.71 55.0 5.95e-01 100.0% 97.5%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.70 48.0 5.59e-01 100.0% 98.5%
4v19R01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.70 28.0 2.71e-01 95.8% 30.4%
5j1hA01 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 51.0 4.03e-01 97.9% 40.1%
2oyhA00 1.20.5.50 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.69 45.0 5.29e-01 95.8% 100.0%
7utzR02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.67 45.0 3.20e-01 90.5% 23.8%
5ha6B00 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 51.0 5.55e-01 100.0% 97.5%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.67 43.0 4.13e-01 100.0% 56.4%
1jmwA00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.67 51.0 4.41e-01 98.9% 52.7%
6xm1A02 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.67 45.0 4.25e-01 93.7% 58.4%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 60.0 6.06e-01 100.0% 97.9%
4wpcA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.64 59.0 4.13e-01 100.0% 45.9%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.64 48.0 5.13e-01 100.0% 92.7%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 58.0 5.48e-01 100.0% 84.4%
2eboA00 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 36.0 3.94e-01 100.0% 70.3%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 28.0 3.29e-01 86.3% 58.2%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 57.0 5.46e-01 100.0% 99.1%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.59 29.0 2.92e-01 95.8% 45.7%
4cgkA01 6.10.250.3150 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.59 53.0 4.10e-01 100.0% 81.3%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.59 34.0 3.90e-01 91.6% 79.1%
2vxzA02 1.10.10.1490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 31.0 3.26e-01 97.9% 56.3%
2fzlA02 6.10.140.1180 Special › Helix non-globular › Helix Hairpins › 0.58 37.0 4.47e-01 93.7% 100.0%
2j0nB00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.58 51.0 4.15e-01 100.0% 96.3%
1nu7D01 1.20.120.750 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 0.58 49.0 4.39e-01 96.8% 65.9%
3ajwA00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 51.0 4.56e-01 100.0% 70.9%
3vbbE01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.57 52.0 4.80e-01 98.9% 83.2%
6giqb01 1.10.287.90 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 43.0 4.29e-01 98.9% 84.4%
7wu7601 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 46.0 4.58e-01 96.8% 90.0%
2yevB01 1.10.287.90 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 43.0 4.39e-01 100.0% 91.4%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 40.0 4.29e-01 88.4% 98.8%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 34.0 3.11e-01 70.5% 94.9%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3422508 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.81 53.0 6.37e-01 100.0% 98.5%
4480996 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.72 51.0 4.37e-01 100.0% 48.3%
3202986 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.70 55.0 4.95e-01 100.0% 62.4%
3951222 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.69 46.0 5.36e-01 86.3% 94.3%
3891023 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 54.0 4.31e-01 100.0% 43.9%
3470807 3755.3.1.49 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › GPHR_N 0.67 53.0 4.10e-01 100.0% 39.5%
3501757 4038.1.1.3 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_connector 0.67 59.0 4.64e-01 100.0% 49.5%
139279 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.66 60.0 6.06e-01 100.0% 97.9%
4947568 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.66 58.0 4.50e-01 97.9% 46.8%
3688466 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.65 61.0 5.01e-01 100.0% 72.5%
3305747 192.2.1.18 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.65 58.0 5.04e-01 100.0% 65.0%
3650111 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.65 59.0 3.83e-01 96.8% 100.0%
4025452 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 60.0 5.56e-01 100.0% 92.2%
4029803 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.64 59.0 5.29e-01 100.0% 83.1%
3586018 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 58.0 5.01e-01 100.0% 65.7%
3720093 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.64 59.0 4.36e-01 100.0% 40.9%
4018376 601.2.1.5 alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr 0.64 50.0 4.38e-01 100.0% 55.9%
4666900 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 58.0 5.30e-01 100.0% 85.6%
3489283 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 60.0 5.22e-01 100.0% 86.7%
3270487 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 59.0 5.60e-01 100.0% 95.5%
3691694 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 59.0 5.31e-01 100.0% 79.2%
3875862 192.7.1.83 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › KIF9 0.63 58.0 5.27e-01 100.0% 81.6%
5039294 4038.1.1.1 alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.63 55.0 3.99e-01 100.0% 37.1%
3410597 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.62 58.0 3.59e-01 100.0% 65.3%
4381440 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 58.0 5.39e-01 100.0% 92.2%
5069235 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 55.0 4.45e-01 96.8% 96.7%
3927319 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 57.0 5.60e-01 97.9% 100.0%
3600254 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.62 53.0 4.22e-01 92.6% 50.8%
4005523 3860.1.1.167 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › MscS_porin 0.62 56.0 4.64e-01 97.9% 82.5%
3937187 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 55.0 5.25e-01 100.0% 83.6%
3757451 3755.3.1.297 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 0.61 56.0 4.68e-01 100.0% 63.7%
4259368 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 57.0 5.20e-01 100.0% 87.5%
4953135 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 57.0 4.84e-01 100.0% 69.7%
3389029 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 45.0 4.20e-01 90.5% 64.3%
3583546 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 57.0 4.95e-01 100.0% 74.8%
3787269 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 55.0 5.23e-01 100.0% 95.5%
3371570 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 55.0 4.70e-01 100.0% 86.7%
3246530 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.59 54.0 4.64e-01 97.9% 65.5%
3212393 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 54.0 5.16e-01 100.0% 98.2%
3977410 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.59 54.0 5.42e-01 97.9% 97.9%
3234976 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 54.0 5.18e-01 100.0% 96.4%
4265142 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 52.0 4.51e-01 100.0% 80.7%
3881316 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.58 53.0 4.18e-01 100.0% 55.9%
3954586 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 53.0 4.31e-01 100.0% 97.1%
996946 3755.2.1.1 alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein › FliJ 0.57 51.0 4.56e-01 100.0% 70.9%
3997603 601.2.1.5 alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr 0.57 52.0 4.49e-01 100.0% 66.9%
3942546 4009.1.1.5 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › YgbA_NO 0.57 31.0 3.32e-01 94.7% 58.8%
3675304 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.56 50.0 4.64e-01 100.0% 77.5%
3838614 3747.1.1.1 a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod 0.56 47.0 4.60e-01 89.5% 97.1%
3819102 4207.1.1.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.56 47.0 3.89e-01 93.7% 75.4%
3250431 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.56 50.0 4.10e-01 97.9% 55.9%
4439153 3747.1.1.1 a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod 0.56 51.0 4.52e-01 100.0% 94.7%
3175421 3922.1.1.312 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF30554 0.56 50.0 4.42e-01 100.0% 91.4%
3601169 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.56 50.0 3.65e-01 100.0% 36.5%
3983048 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.56 49.0 3.28e-01 100.0% 24.6%
2526355 7094.1.1.2 alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › LIS_MGM1 0.55 52.0 5.02e-01 100.0% 98.1%
3347740 3560.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 0.55 47.0 4.20e-01 100.0% 66.9%
3758701 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.54 49.0 4.96e-01 97.9% 100.0%
3735556 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.54 49.0 4.96e-01 100.0% 100.0%
3630322 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 49.0 3.08e-01 100.0% 19.4%
3215252 109.4.1.1134 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_INTS8_3 0.53 45.0 2.92e-01 93.7% 39.8%
4134003 3939.1.1.141 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › USHBP1_PDZ-bd 0.51 49.0 4.06e-01 100.0% 63.3%
3171042 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.50 44.0 4.35e-01 97.9% 100.0%
4216439 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.50 29.0 3.35e-01 89.5% 78.6%