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OR354858.1__WNM55597.1__CoNPh35_CDS0028__00027
Bact-VirOR354858.1__WNM55597.1__CoNPh35_CDS0028__00027
Identity
- Accession:
- OR354858 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Rountreeviridae›
Andhravirus›
Staphylococcus_phage_S-CoN_Ph35
TaxID: 3076593
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-55
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5m0nA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.73 | 58.0 | 3.42e-01 | 88.9% | 64.8% |
| 4qmfD02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.61 | 45.0 | 3.90e-01 | 83.3% | 76.1% |
| 3euhD01 | 1.10.10.2250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 39.0 | 3.69e-01 | 79.6% | 75.7% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.54 | 44.0 | 4.01e-01 | 100.0% | 88.0% |
| 1milA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 45.0 | 3.77e-01 | 100.0% | 87.5% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.53 | 44.0 | 3.84e-01 | 100.0% | 79.8% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.62e-01 | 100.0% | 69.9% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 32.0 | 2.65e-01 | 70.4% | 33.0% |
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.37e-01 | 72.2% | 93.7% |
| 3kdrA03 | 3.30.1120.70 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 38.0 | 3.94e-01 | 100.0% | 98.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4358885 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.65 | 38.0 | 2.38e-01 | 88.9% | 10.6% |
| 3601206 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.59 | 50.0 | 4.57e-01 | 100.0% | 92.0% |
| 3699552 | 327.11.2.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KRR1-like_KH2 | 0.58 | 42.0 | 3.50e-01 | 81.5% | 60.9% |
| 3901257 | 2004.1.1.197 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_3 | 0.54 | 42.0 | 2.59e-01 | 92.6% | 27.2% |
| 4034435 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.53 | 39.0 | 3.16e-01 | 79.6% | 48.6% |
| 4968297 | 304.4.1.2 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase | 0.53 | 43.0 | 3.87e-01 | 100.0% | 92.9% |
| 4017595 | 306.10.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › PF28980 | 0.51 | 39.0 | 3.14e-01 | 88.9% | 85.6% |
| 4033553 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.51 | 41.0 | 3.51e-01 | 100.0% | 76.2% |
| 3599569 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.50 | 38.0 | 3.33e-01 | 92.6% | 73.0% |