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OR359401.1__WNO28902.1__vBKpnMJEC_0015__00015
Bact-VirOR359401.1__WNO28902.1__vBKpnMJEC_0015__00015
Identity
- Accession:
- OR359401 ↗
- Kingdom:
- phage
Quality
91.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Jiaodavirus›
Klebsiella_phage_vB_KpnM-JEC
TaxID: 3075854
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-91
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 56.0 | 5.78e-01 | 94.1% | 76.9% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 51.0 | 5.93e-01 | 86.8% | 100.0% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 57.0 | 6.09e-01 | 100.0% | 93.2% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 60.0 | 5.79e-01 | 100.0% | 76.6% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 56.0 | 6.04e-01 | 91.2% | 94.7% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 51.0 | 5.57e-01 | 92.6% | 87.5% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 56.0 | 6.04e-01 | 89.7% | 94.7% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 56.0 | 5.78e-01 | 91.2% | 84.6% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.73 | 48.0 | 5.20e-01 | 92.6% | 80.7% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 63.0 | 5.90e-01 | 100.0% | 79.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 56.0 | 5.32e-01 | 92.6% | 72.2% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 57.0 | 4.59e-01 | 100.0% | 45.1% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.70 | 60.0 | 5.36e-01 | 100.0% | 67.4% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 59.0 | 6.10e-01 | 97.1% | 98.4% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 58.0 | 5.68e-01 | 95.6% | 84.7% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 5.16e-01 | 100.0% | 86.7% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 55.0 | 5.56e-01 | 91.2% | 88.1% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 5.42e-01 | 91.2% | 98.1% |
| 2vgeA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.67 | 60.0 | 4.26e-01 | 100.0% | 33.3% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 59.0 | 5.83e-01 | 100.0% | 90.3% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.67 | 61.0 | 5.38e-01 | 100.0% | 70.1% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.67 | 59.0 | 5.37e-01 | 100.0% | 86.7% |
| 2e5kA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 55.0 | 5.67e-01 | 92.6% | 96.9% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.65 | 45.0 | 5.06e-01 | 94.1% | 98.0% |
| 3j7yD01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 46.0 | 3.98e-01 | 75.0% | 52.8% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 44.0 | 4.83e-01 | 89.7% | 98.0% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.64 | 56.0 | 5.45e-01 | 100.0% | 90.8% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 54.0 | 5.22e-01 | 100.0% | 86.7% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 45.0 | 3.68e-01 | 79.4% | 74.8% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 52.0 | 4.07e-01 | 100.0% | 43.7% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.59 | 48.0 | 4.68e-01 | 89.7% | 89.2% |
| 1okeB02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.59 | 40.0 | 3.90e-01 | 94.1% | 63.6% |
| 3tw6D02 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.57 | 41.0 | 4.00e-01 | 94.1% | 68.4% |
| 3b59A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 39.0 | 3.27e-01 | 76.5% | 99.2% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.52 | 37.0 | 3.72e-01 | 77.9% | 88.7% |
| 2k7iA01 | 3.30.160.160 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like | 0.51 | 31.0 | 3.60e-01 | 92.6% | 87.5% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 39.0 | 3.25e-01 | 86.8% | 75.2% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058103 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 62.0 | 6.29e-01 | 97.1% | 79.4% |
| 5029655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 62.0 | 6.56e-01 | 97.1% | 90.0% |
| 4941620 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 60.0 | 6.37e-01 | 94.1% | 86.7% |
| 4644007 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.82 | 60.0 | 6.37e-01 | 94.1% | 88.1% |
| 5069062 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.82 | 62.0 | 6.57e-01 | 97.1% | 91.5% |
| 4138563 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 60.0 | 6.13e-01 | 94.1% | 80.0% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 61.0 | 4.64e-01 | 100.0% | 35.5% |
| 4484893 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 59.0 | 6.02e-01 | 95.6% | 81.5% |
| 4354770 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.79 | 59.0 | 5.90e-01 | 97.1% | 77.1% |
| 5042614 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 55.0 | 5.54e-01 | 91.2% | 71.4% |
| 1140051 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.77 | 52.0 | 5.99e-01 | 88.2% | 98.0% |
| 3617355 | 4.1.1.348 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box | 0.76 | 58.0 | 5.16e-01 | 100.0% | 57.9% |
| 3365104 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.75 | 64.0 | 6.51e-01 | 100.0% | 96.9% |
| 4621153 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 53.0 | 5.62e-01 | 92.6% | 85.0% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.74 | 59.0 | 5.73e-01 | 100.0% | 77.3% |
| 3583597 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 55.0 | 5.01e-01 | 100.0% | 62.2% |
| 4012002 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 63.0 | 6.27e-01 | 100.0% | 94.3% |
| 3926624 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.70 | 45.0 | 5.03e-01 | 97.1% | 90.0% |
| 4105348 | 4.1.1.394 ↗ | beta barrels › SH3 › SH3 › SH3 › SlpA | 0.68 | 56.0 | 5.80e-01 | 89.7% | 100.0% |
| 3423859 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 62.0 | 5.63e-01 | 100.0% | 90.0% |
| 4110324 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.68 | 57.0 | 5.51e-01 | 97.1% | 88.7% |
| 3387119 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.67 | 55.0 | 5.03e-01 | 100.0% | 67.8% |
| 4519674 | 4.1.1.186 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5397 | 0.67 | 51.0 | 5.41e-01 | 100.0% | 96.6% |
| 3990857 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 52.0 | 5.48e-01 | 100.0% | 95.0% |
| 4550532 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.66 | 56.0 | 5.10e-01 | 92.6% | 71.1% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 54.0 | 5.16e-01 | 91.2% | 81.2% |
| 3979986 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.66 | 58.0 | 5.61e-01 | 98.5% | 96.0% |
| 5049033 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.65 | 56.0 | 5.51e-01 | 98.5% | 90.7% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.65 | 54.0 | 5.00e-01 | 100.0% | 72.9% |
| 3386779 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.64 | 56.0 | 5.48e-01 | 98.5% | 93.2% |
| 5055435 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.64 | 57.0 | 5.66e-01 | 100.0% | 98.6% |
| 4033110 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.64 | 56.0 | 5.45e-01 | 100.0% | 93.3% |
| 4952214 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.64 | 55.0 | 5.39e-01 | 98.5% | 90.7% |
| 5030535 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.63 | 54.0 | 5.31e-01 | 98.5% | 93.3% |
| 5038519 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.62 | 46.0 | 3.95e-01 | 80.9% | 73.9% |
| 4575597 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.62 | 47.0 | 3.89e-01 | 83.8% | 83.8% |
| 4648652 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.61 | 56.0 | 4.78e-01 | 100.0% | 65.7% |
| None | — | 0.60 | 50.0 | 2.93e-01 | 95.6% | 40.2% | |
| 4941299 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.60 | 46.0 | 4.36e-01 | 100.0% | 69.4% |
| 3278853 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 44.0 | 4.46e-01 | 100.0% | 89.2% |
| 4309540 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.57 | 42.0 | 3.71e-01 | 80.9% | 77.1% |
| 4031789 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.56 | 41.0 | 4.31e-01 | 77.9% | 96.7% |
| 4876264 | 275.1.1.4 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_5 | 0.55 | 41.0 | 2.70e-01 | 79.4% | 21.0% |
| 5082388 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 45.0 | 3.60e-01 | 91.2% | 77.8% |
| 4979493 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 45.0 | 3.74e-01 | 91.2% | 91.7% |
| 5026160 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 45.0 | 3.84e-01 | 91.2% | 91.8% |
| 5028042 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 45.0 | 3.73e-01 | 91.2% | 85.8% |
| 3656952 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 40.0 | 3.49e-01 | 82.4% | 77.4% |
| 4179590 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 44.0 | 3.67e-01 | 91.2% | 84.2% |
| 3965157 | 2003.1.2.58 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 | 0.53 | 46.0 | 3.39e-01 | 98.5% | 63.2% |
| 4941125 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 43.0 | 3.69e-01 | 91.2% | 93.0% |
| 4952930 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.53 | 46.0 | 4.34e-01 | 100.0% | 96.5% |
| 5068438 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 42.0 | 3.49e-01 | 91.2% | 78.5% |
| 5053650 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 43.0 | 3.55e-01 | 91.2% | 88.8% |
| 5037884 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 42.0 | 3.67e-01 | 91.2% | 89.1% |
| 5076251 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 43.0 | 3.66e-01 | 91.2% | 91.8% |
| 3398585 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.46e-01 | 94.1% | 70.0% |
| 3941288 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 43.0 | 3.46e-01 | 100.0% | 97.2% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 43.0 | 3.89e-01 | 100.0% | 69.5% |
| 682 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.50 | 42.0 | 3.81e-01 | 100.0% | 68.4% |