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OR359403.1__WMX18589.1__X__00012

Bact-Vir

OR359403.1__WMX18589.1__X__00012

Identity

Accession:
OR359403 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aeromonas_phage_1233

TaxID: 3074390

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 440-528
PDB
Domain cluster: rep: NC_055736.1__YP_010093527.1__KNT80_gp84__00084__D8-79
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00940.25 best RNA_pol 66.2 3.50e-18 91.0% 15.8%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mswD04 1.10.287.280 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.96 81.0 8.66e-01 89.9% 100.0%
3q23A04 6.10.140.1370 Special › Helix non-globular › Helix Hairpins › 0.75 59.0 5.94e-01 85.4% 98.9%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 44.0 4.58e-01 87.6% 87.8%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 43.0 4.42e-01 87.6% 82.8%
5zzjA02 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 41.0 2.92e-01 85.4% 88.5%
4uobA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.53 42.0 3.87e-01 91.0% 85.7%
2e6oA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.53 32.0 3.31e-01 88.8% 62.1%
7kypB01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.52 42.0 3.01e-01 87.6% 74.7%
152lA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.52 42.0 3.54e-01 92.1% 99.4%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.52 41.0 3.47e-01 86.5% 68.6%
3dddA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 37.0 3.35e-01 77.5% 90.8%
3k3fA00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.51 37.0 2.59e-01 77.5% 81.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2934 4966.1.1.1 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › RNA_pol 0.95 83.0 8.75e-01 92.1% 100.0%
3649179 4966.1.1.1 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › RNA_pol 0.94 88.0 8.60e-01 97.8% 94.7%
3707083 4966.1.1.1 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › RNA_pol 0.94 88.0 7.13e-01 97.8% 59.3%
3596110 4966.1.1.0 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase 0.93 84.0 8.61e-01 93.3% 100.0%
4026155 4966.1.1.1 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › RNA_pol 0.92 83.0 8.52e-01 94.4% 100.0%
4871955 304.48.1.11 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.90 70.0 7.75e-01 80.9% 100.0%
3245967 4966.1.1.1 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › RNA_pol 0.90 79.0 8.09e-01 92.1% 100.0%
4588821 4966.1.1.1 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › RNA_pol 0.83 76.0 7.59e-01 96.6% 100.0%
4484002 4966.1.1.0 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase 0.82 70.0 7.36e-01 89.9% 100.0%
4250617 4966.1.1.0 ↗ alpha arrays › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase › inserted helical bundle subdomain in T7 RNA polymerase 0.77 67.0 6.77e-01 94.4% 95.6%
3551714 592.6.1.2 ↗ alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › PF26582 0.66 51.0 4.93e-01 86.5% 76.2%
3393634 592.6.1.2 ↗ alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › PF26582 0.64 49.0 4.75e-01 86.5% 74.3%
4034384 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.56 43.0 3.44e-01 85.4% 87.4%
4029637 314.1.1.9 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.55 44.0 3.03e-01 89.9% 23.9%
5043417 187.1.1.2 ↗ alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_9 0.55 46.0 4.11e-01 93.3% 71.5%
3515942 7516.1.1.82 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Chitin_synth_2 0.54 45.0 2.72e-01 95.5% 50.8%
5037018 187.1.1.2 ↗ alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_9 0.54 43.0 4.34e-01 87.6% 97.8%
4985953 187.1.1.9 ↗ alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_7 0.54 45.0 4.16e-01 93.3% 81.7%
3231495 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.53 45.0 3.39e-01 96.6% 74.6%
3313113 109.4.1.54 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Cse1 0.53 39.0 2.61e-01 76.4% 27.0%
4974404 7014.1.1.1 ↗ alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.53 36.0 3.30e-01 70.8% 57.5%
3989794 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.53 42.0 3.07e-01 87.6% 72.0%
3503552 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.53 40.0 3.49e-01 86.5% 52.5%
5022856 7014.1.1.1 ↗ alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.52 36.0 3.25e-01 70.8% 54.0%
None — 0.52 45.0 2.79e-01 100.0% 56.8%
4979024 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.51 42.0 3.04e-01 93.3% 83.9%
3947387 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.51 42.0 3.03e-01 96.6% 95.1%
D2 high residues 537-601
PDB
D3 medium residues 28-120_189-208
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mswD01 1.10.1320.10 Mainly Alpha › Orthogonal Bundle › T7 RNA polymerase; domain 1 › DNA-directed RNA polymerase, N-terminal domain 0.85 80.0 5.66e-01 100.0% 75.2%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 33.0 3.51e-01 98.2% 49.0%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 32.0 3.37e-01 97.3% 46.6%
4egwA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.64 32.0 3.17e-01 100.0% 43.7%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.61 34.0 3.39e-01 100.0% 52.1%
2pmsC00 6.10.140.920 Special › Helix non-globular › Helix Hairpins › 0.60 38.0 3.88e-01 72.6% 65.1%
1nktA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.59 41.0 3.50e-01 82.3% 45.8%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.58 36.0 3.99e-01 98.2% 77.8%
2ddhA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 33.0 3.15e-01 98.2% 47.0%
7dluA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 34.0 3.56e-01 71.7% 64.8%
4nswB01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.54 46.0 3.53e-01 100.0% 40.6%
1x8zB00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.54 39.0 3.61e-01 76.1% 83.0%
2fsfB04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.53 47.0 3.89e-01 99.1% 85.8%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.53 34.0 3.44e-01 80.5% 63.8%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 31.0 3.22e-01 94.7% 61.5%
1quuA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 33.0 3.23e-01 97.3% 57.9%
2f07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 37.0 3.13e-01 77.9% 63.3%
2efkA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.50 45.0 3.46e-01 100.0% 46.6%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3263522 5050.1.1.11 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › UNC-93 0.67 33.0 2.67e-01 99.1% 24.9%
4623302 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 35.0 2.70e-01 99.1% 23.7%
3438493 632.15.1.5 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › Rx_N 0.61 35.0 3.26e-01 98.2% 44.8%
4412948 5050.1.1.25 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › TLC 0.61 33.0 2.65e-01 95.6% 26.2%
3937465 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 33.0 2.68e-01 100.0% 28.4%
3323416 3831.1.1.7 ↗ alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › DUF842 0.57 32.0 3.32e-01 97.3% 57.1%
3939799 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.57 32.0 2.99e-01 99.1% 45.0%
3630583 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.56 33.0 3.39e-01 100.0% 59.1%
4444896 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.56 36.0 3.77e-01 100.0% 70.5%
4657341 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.55 37.0 3.70e-01 71.7% 65.8%
3189791 601.19.1.18 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Mmc1_C 0.54 48.0 3.88e-01 100.0% 88.7%
3623422 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.54 38.0 2.73e-01 70.8% 48.0%
3607831 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.54 30.0 3.24e-01 98.2% 61.0%
3766182 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.53 45.0 4.15e-01 100.0% 72.4%
5047149 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.52 47.0 4.11e-01 100.0% 68.8%
3739377 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.52 47.0 3.47e-01 100.0% 46.8%
3733140 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.52 43.0 3.89e-01 97.3% 65.8%
4001186 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.51 41.0 3.47e-01 100.0% 52.1%
3691418 601.19.1.21 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › DUF7605 0.50 45.0 3.42e-01 100.0% 92.4%
3944731 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.50 40.0 3.51e-01 97.3% 57.6%
3678120 3860.1.1.210 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › PF28583 0.50 42.0 3.22e-01 94.7% 63.1%
3620978 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 40.0 2.95e-01 100.0% 30.6%
4116038 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.50 42.0 3.85e-01 97.3% 67.7%
D4 medium residues 121-188
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.29e-01 100.0% 57.1%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.76e-01 100.0% 76.6%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.57e-01 100.0% 93.1%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.87e-01 100.0% 58.2%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.71 45.0 4.92e-01 86.8% 83.0%
2mzwA01 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.70 45.0 4.40e-01 92.6% 59.2%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.18e-01 100.0% 66.7%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 4.63e-01 100.0% 53.6%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.68 42.0 3.77e-01 72.1% 44.3%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 5.46e-01 95.6% 98.2%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 5.02e-01 100.0% 69.7%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.55e-01 100.0% 53.5%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.56e-01 100.0% 57.3%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.70e-01 100.0% 56.5%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.72e-01 100.0% 60.0%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.64 54.0 5.22e-01 100.0% 83.7%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.64 46.0 3.46e-01 76.5% 98.2%
1n5uA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.64 45.0 3.96e-01 75.0% 49.5%
2f1fA02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.64 35.0 3.41e-01 95.6% 46.2%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 41.0 4.19e-01 98.5% 67.7%
2e1qC10 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.63 37.0 3.05e-01 75.0% 31.2%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.62 42.0 3.98e-01 92.6% 58.5%
2hgcA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.06e-01 100.0% 64.1%
4oo1I01 2.40.50.880 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 44.0 4.28e-01 100.0% 72.0%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.59 47.0 4.69e-01 100.0% 85.9%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.32e-01 100.0% 66.4%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.58 40.0 3.71e-01 98.5% 56.5%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.57 46.0 4.11e-01 100.0% 61.4%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 41.0 3.96e-01 100.0% 68.0%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 47.0 3.79e-01 92.6% 78.8%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 41.0 3.85e-01 95.6% 60.9%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.56 40.0 4.02e-01 100.0% 74.3%
2ch0A01 1.10.10.1180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain 0.56 45.0 4.18e-01 100.0% 72.4%
3qthB00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.55 41.0 3.14e-01 80.9% 61.0%
1b8bA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.55 46.0 2.80e-01 98.5% 20.1%
2jc4A00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.54 45.0 3.10e-01 94.1% 86.3%
1xhsA00 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.53 40.0 3.51e-01 85.3% 81.4%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 44.0 3.86e-01 100.0% 76.3%
2jlnA00 1.10.4160.10 Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease 0.53 47.0 2.83e-01 100.0% 54.6%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.53 45.0 4.23e-01 94.1% 82.9%
1w9cA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 43.0 2.82e-01 92.6% 20.6%
1tkjA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 42.0 2.90e-01 92.6% 96.0%
2h00B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 45.0 3.26e-01 100.0% 70.0%
4zkdA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 2.89e-01 89.7% 88.8%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.13e-01 98.5% 71.7%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.52 32.0 2.87e-01 91.2% 39.6%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 37.0 3.74e-01 100.0% 82.1%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 3.17e-01 98.5% 75.5%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 40.0 3.66e-01 86.8% 93.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4609006 101.1.21.0 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.84 76.0 5.15e-01 100.0% 44.8%
5010592 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.80 61.0 4.99e-01 100.0% 45.8%
5075830 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 60.0 5.11e-01 100.0% 50.9%
5048761 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 59.0 5.85e-01 100.0% 77.1%
4971494 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 4.91e-01 100.0% 47.8%
3602557 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.77 62.0 5.58e-01 100.0% 64.4%
5032312 101.1.2.271 ↗ alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.77 58.0 4.92e-01 100.0% 50.0%
3988732 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 61.0 5.25e-01 100.0% 55.6%
4979651 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 58.0 5.29e-01 100.0% 62.2%
5075002 101.1.2.525 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.76 57.0 5.11e-01 100.0% 57.9%
4976098 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 57.0 5.70e-01 100.0% 78.6%
5076142 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 58.0 5.17e-01 100.0% 58.9%
3797522 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 5.51e-01 100.0% 63.0%
5054938 101.1.2.271 ↗ alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.75 57.0 4.75e-01 100.0% 47.1%
4983310 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 60.0 5.29e-01 100.0% 60.0%
5081519 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 58.0 5.08e-01 100.0% 57.0%
5078847 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.74 58.0 5.29e-01 100.0% 64.4%
5041315 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 57.0 5.08e-01 100.0% 58.0%
4996616 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 58.0 6.22e-01 97.1% 98.3%
5044327 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 58.0 5.14e-01 100.0% 59.0%
5071263 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 5.23e-01 100.0% 64.4%
3926827 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.73 65.0 3.76e-01 100.0% 11.8%
5011653 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 56.0 4.76e-01 100.0% 50.9%
4950221 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.73 60.0 5.08e-01 100.0% 55.6%
4983426 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 55.0 5.27e-01 100.0% 70.0%
3587554 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 58.0 5.15e-01 100.0% 61.0%
5071269 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 61.0 4.30e-01 100.0% 30.5%
3174361 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.72 63.0 4.35e-01 100.0% 30.7%
4310506 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.72 63.0 4.38e-01 100.0% 33.8%
4928190 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.71 54.0 5.06e-01 100.0% 66.7%
5040376 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.71 62.0 5.14e-01 100.0% 55.7%
3347818 101.1.2.529 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7599 0.71 61.0 5.93e-01 100.0% 86.7%
4025104 101.1.2.122 ↗ alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.71 53.0 5.01e-01 100.0% 67.5%
3990493 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.65e-01 100.0% 74.4%
5031473 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 58.0 5.02e-01 100.0% 59.0%
3167842 101.1.2.271 ↗ alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.70 52.0 4.75e-01 100.0% 60.0%
3628907 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.69 62.0 3.39e-01 100.0% 7.0%
3381794 207.1.1.57 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6,LRR_8 0.69 47.0 2.57e-01 70.6% 4.8%
3932128 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 4.75e-01 100.0% 47.9%
4314672 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 56.0 4.92e-01 100.0% 59.0%
3820802 101.1.2.529 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7599 0.69 60.0 5.14e-01 100.0% 60.9%
3831895 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.69 61.0 4.06e-01 100.0% 27.3%
4940657 101.1.2.269 ↗ alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea 0.69 59.0 4.55e-01 100.0% 49.4%
3666825 101.1.4.12 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC 0.69 61.0 5.21e-01 100.0% 67.3%
4998580 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 50.0 4.59e-01 100.0% 58.9%
4944051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.24e-01 100.0% 36.5%
4966558 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.03e-01 100.0% 68.2%
3725706 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 62.0 5.44e-01 100.0% 74.0%
3406884 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 60.0 4.10e-01 100.0% 28.0%
3843442 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.68 61.0 4.97e-01 100.0% 56.8%
3657246 101.1.2.525 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.68 54.0 4.88e-01 100.0% 62.1%
3516107 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.68 60.0 5.08e-01 100.0% 62.6%
3542800 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.68 60.0 4.05e-01 100.0% 28.2%
5040732 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 61.0 5.19e-01 100.0% 61.8%
3228509 101.1.4.12 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC 0.68 58.0 4.71e-01 100.0% 49.6%
3887336 101.1.4.12 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC 0.67 59.0 4.14e-01 100.0% 32.0%
4970289 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.67 51.0 4.74e-01 100.0% 63.3%
3481547 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.67 59.0 4.58e-01 100.0% 54.7%
3332888 101.1.2.86 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.67 56.0 5.54e-01 100.0% 90.7%
3792911 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.67 58.0 4.93e-01 100.0% 61.7%
5003621 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 5.27e-01 100.0% 70.5%
4953964 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 58.0 5.01e-01 100.0% 62.7%
4376064 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 50.0 5.03e-01 100.0% 82.6%
3664080 101.1.2.86 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.65 54.0 4.75e-01 100.0% 61.8%
3622222 101.1.2.164 ↗ alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 0.64 48.0 4.97e-01 100.0% 86.2%
4988168 304.15.1.0 ↗ a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.63 37.0 3.94e-01 92.6% 65.0%
1299892 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.61 48.0 4.19e-01 100.0% 54.4%
4635715 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 4.08e-01 100.0% 48.8%
3938065 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 4.79e-01 100.0% 85.3%
3588902 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.60 50.0 3.92e-01 91.2% 81.4%
3282565 7579.1.1.118 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9, FrsA-like 0.59 53.0 3.23e-01 98.5% 27.2%
3494759 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 52.0 4.40e-01 100.0% 70.4%
4000244 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.57 40.0 2.61e-01 73.5% 27.6%
3627616 3636.1.1.3 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain › ARCH_RTEL1 0.57 42.0 3.13e-01 77.9% 90.3%
4490186 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.54 38.0 2.44e-01 73.5% 35.7%
5068574 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.54 44.0 2.89e-01 91.2% 89.7%
5034133 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.53 43.0 2.85e-01 91.2% 81.6%
5033504 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.53 43.0 2.90e-01 91.2% 90.0%
4027999 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.53 37.0 3.53e-01 100.0% 61.2%
5055279 1075.1.2.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.52 45.0 3.25e-01 97.1% 85.9%
3415024 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.52 43.0 2.88e-01 98.5% 74.4%
3603029 873.1.1.11 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27343 0.51 40.0 3.28e-01 86.8% 62.2%
4520138 328.3.1.2 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 0.51 43.0 3.60e-01 94.1% 87.5%
3922189 601.48.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain 0.51 39.0 3.93e-01 82.4% 85.7%
4972691 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.51 32.0 2.95e-01 98.5% 43.0%
3216304 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.51 43.0 2.78e-01 98.5% 69.6%
4995849 304.126.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.50 33.0 3.06e-01 94.1% 51.1%
3926000 5001.1.1.41 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.50 42.0 2.73e-01 97.1% 72.8%
D5 medium residues 209-263_407-439
PDB
Domain cluster: rep: OM416779.1__ULF50131.1__PSCSP1u_00006__00006__D238-287_370-399
D6 medium residues 264-406
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.71 31.0 3.94e-01 92.3% 67.0%
2fcwA00 1.20.81.10 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain 0.69 41.0 4.73e-01 92.3% 80.2%
4i0xH00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 36.0 4.95e-01 88.1% 100.0%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.66 37.0 4.71e-01 97.2% 91.9%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 37.0 4.19e-01 96.5% 72.7%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 27.0 3.63e-01 92.3% 71.4%
1fntc01 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.64 41.0 3.77e-01 95.1% 48.4%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.64 42.0 5.01e-01 89.5% 100.0%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.64 37.0 4.20e-01 91.6% 73.2%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.64 29.0 3.86e-01 92.3% 79.7%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.63 33.0 3.99e-01 78.3% 74.2%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.63 35.0 4.01e-01 95.8% 71.7%
1z23A00 1.20.120.830 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain 0.63 35.0 3.35e-01 95.8% 46.6%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.63 27.0 3.41e-01 82.5% 65.5%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.62 40.0 4.45e-01 93.0% 80.7%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.62 31.0 3.38e-01 87.4% 54.4%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.62 35.0 4.57e-01 91.6% 100.0%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.61 34.0 4.05e-01 70.6% 78.6%
2efkA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 44.0 3.59e-01 89.5% 40.1%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.61 46.0 5.06e-01 88.1% 95.7%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.61 36.0 3.95e-01 96.5% 69.7%
2ap3A00 1.20.120.570 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like 0.61 41.0 3.69e-01 94.4% 50.5%
2m6uA00 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.60 26.0 3.41e-01 86.0% 70.7%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 36.0 4.05e-01 93.0% 77.6%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.60 27.0 3.43e-01 94.4% 69.4%
5nl6A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 34.0 3.84e-01 88.8% 72.2%
2pihA00 1.20.1500.10 Mainly Alpha › Up-down Bundle › YheA-like fold › YheA/YmcA-like 0.60 41.0 4.44e-01 72.0% 82.1%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 33.0 3.88e-01 97.9% 77.2%
2ot4A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 29.0 3.30e-01 90.9% 59.8%
3vkgA02 1.20.140.100 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain 0.57 33.0 3.30e-01 90.2% 53.1%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.55 46.0 3.55e-01 93.7% 40.8%
4wr4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 26.0 2.91e-01 97.2% 57.1%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 47.0 4.53e-01 95.1% 84.3%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.53 31.0 3.82e-01 83.9% 98.8%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.52 45.0 4.17e-01 94.4% 100.0%
3qa8A04 1.20.1270.250 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.50 42.0 3.63e-01 91.6% 66.1%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975739 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 46.0 3.31e-01 94.4% 24.2%
3876247 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 41.0 4.48e-01 95.1% 72.5%
3961148 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 44.0 4.79e-01 94.4% 79.2%
3189104 603.1.1.19 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N 0.67 49.0 4.11e-01 91.6% 46.5%
4660205 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.67 45.0 4.67e-01 93.0% 72.6%
3905412 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.66 37.0 3.77e-01 95.1% 55.2%
3887313 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.65 38.0 4.26e-01 97.2% 72.2%
3473984 603.1.1.97 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.65 53.0 4.33e-01 85.3% 78.4%
4355162 5069.1.1.54 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrome_B, Cytochrom_B_N_2 0.64 39.0 3.76e-01 77.6% 53.1%
2725659 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.64 39.0 4.10e-01 97.9% 66.4%
3812652 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.63 46.0 4.18e-01 93.0% 55.4%
4937604 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.63 40.0 4.39e-01 92.3% 78.3%
4038138 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 51.0 5.40e-01 96.5% 93.8%
3385045 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 40.0 4.18e-01 94.4% 69.2%
3699451 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 47.0 5.22e-01 95.1% 96.5%
3694833 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 47.0 4.89e-01 95.8% 86.2%
4013791 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.62 40.0 3.56e-01 97.2% 46.0%
3566007 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.62 36.0 4.04e-01 97.9% 71.3%
3513888 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.61 44.0 4.30e-01 95.1% 67.7%
4937093 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.61 48.0 5.25e-01 94.4% 99.2%
3972084 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.61 47.0 4.99e-01 99.3% 92.0%
3996708 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 43.0 4.53e-01 95.8% 79.2%
3712647 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.61 53.0 4.14e-01 96.5% 84.1%
2698234 192.24.1.1 ↗ alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RPC3_helical 0.60 43.0 4.83e-01 91.6% 97.2%
4018046 3291.1.1.143 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › ALIX_LYPXL_bnd 0.60 42.0 4.03e-01 93.0% 61.2%
3934599 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.59 31.0 3.55e-01 81.8% 67.6%
3240682 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 37.0 4.18e-01 79.0% 82.7%
3920125 3755.3.1.450 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Uso1_p115_C 0.58 51.0 4.59e-01 94.4% 86.2%
4116939 2004.1.1.525 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B 0.57 50.0 3.40e-01 93.0% 28.7%
4220356 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.57 52.0 3.89e-01 97.2% 45.4%
3676738 6158.1.1.0 ↗ alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region 0.57 43.0 4.52e-01 91.6% 86.9%
3766182 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.56 48.0 4.82e-01 94.4% 90.3%
3804219 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.56 35.0 4.28e-01 83.2% 100.0%
4116038 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.56 46.0 4.47e-01 89.5% 79.4%
4947568 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.56 50.0 4.51e-01 95.8% 83.7%
3240634 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.56 48.0 4.70e-01 94.4% 85.2%
3880841 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.54 49.0 4.54e-01 97.9% 98.3%
3737296 192.2.1.18 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.54 40.0 4.22e-01 93.0% 84.6%
3877354 3291.1.1.14 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › LAP2alpha 0.54 41.0 3.62e-01 82.5% 56.9%
3699468 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.53 47.0 4.14e-01 95.8% 66.5%
3774121 150.1.1.119 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Clusterin 0.51 45.0 4.37e-01 95.8% 98.8%