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OR367448.1__WLW40595.1__HIBIKMCM_00028__00028
Bact-VirOR367448.1__WLW40595.1__HIBIKMCM_00028__00028
Identity
- Accession:
- OR367448 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
TaxID: 3034917
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 121-205
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x9mA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.98 | 95.0 | 7.09e-01 | 100.0% | 47.8% |
| 4x0qA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.81 | 75.0 | 6.21e-01 | 100.0% | 88.8% |
| 2rqkA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.78 | 57.0 | 5.20e-01 | 100.0% | 59.6% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.76 | 51.0 | 5.59e-01 | 92.9% | 86.6% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 61.0 | 5.59e-01 | 95.3% | 78.3% |
| 1b8aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.71 | 63.0 | 4.18e-01 | 97.6% | 82.0% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.70 | 60.0 | 5.52e-01 | 96.5% | 75.0% |
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.70 | 50.0 | 4.75e-01 | 100.0% | 64.0% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.70 | 61.0 | 5.50e-01 | 97.6% | 77.1% |
| 1yqhA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 51.0 | 4.78e-01 | 95.3% | 64.4% |
| 3ezuA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.69 | 62.0 | 5.13e-01 | 100.0% | 59.5% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 58.0 | 5.30e-01 | 96.5% | 77.2% |
| 2c2nA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.66 | 49.0 | 5.12e-01 | 96.5% | 87.0% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 50.0 | 4.98e-01 | 98.8% | 78.7% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.65 | 59.0 | 4.68e-01 | 100.0% | 50.0% |
| 3mr7A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.65 | 58.0 | 4.64e-01 | 100.0% | 52.6% |
| 1f5aA01 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.64 | 54.0 | 5.07e-01 | 94.1% | 80.4% |
| 4ht4A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.63 | 51.0 | 3.97e-01 | 90.6% | 51.0% |
| 2fltA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.62 | 52.0 | 4.75e-01 | 96.5% | 82.1% |
| 6nhiA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 54.0 | 3.62e-01 | 100.0% | 92.6% |
| 1otgA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.61 | 51.0 | 4.58e-01 | 96.5% | 79.2% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.61 | 48.0 | 4.01e-01 | 87.1% | 56.0% |
| 3a98B01 | 6.10.10.90 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.60 | 40.0 | 4.13e-01 | 84.7% | 71.6% |
| 6ulxA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.60 | 48.0 | 4.70e-01 | 94.1% | 80.4% |
| 5x9vA01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.58 | 45.0 | 3.26e-01 | 83.5% | 94.7% |
| 3oq2A00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 4.21e-01 | 100.0% | 70.7% |
| 2i8eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 41.0 | 4.29e-01 | 100.0% | 86.5% |
| 4tpsD00 | 3.30.300.180 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DnaA, N-terminal domain | 0.57 | 49.0 | 4.92e-01 | 98.8% | 96.4% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 47.0 | 3.39e-01 | 97.6% | 75.2% |
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 43.0 | 3.37e-01 | 88.2% | 69.6% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.53 | 43.0 | 3.31e-01 | 92.9% | 77.2% |
| 3dfuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 3.88e-01 | 92.9% | 87.6% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.52 | 45.0 | 4.24e-01 | 98.8% | 83.0% |
| 1e6vB02 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.52 | 44.0 | 3.06e-01 | 92.9% | 42.2% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.51 | 43.0 | 3.53e-01 | 97.6% | 91.3% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 44.0 | 3.59e-01 | 100.0% | 84.5% |
| 3k93A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.50 | 42.0 | 3.18e-01 | 96.5% | 39.9% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4379259 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.93 | 81.0 | 7.36e-01 | 100.0% | 71.6% |
| 3496338 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.91 | 83.0 | 7.60e-01 | 100.0% | 77.1% |
| 4975021 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.91 | 77.0 | 7.62e-01 | 100.0% | 86.4% |
| 3601834 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.88 | 81.0 | 7.31e-01 | 100.0% | 75.5% |
| 3407163 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.85 | 79.0 | 6.90e-01 | 100.0% | 69.7% |
| 4588120 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.74 | 63.0 | 5.78e-01 | 92.9% | 80.0% |
| 3593420 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.73 | 62.0 | 5.65e-01 | 94.1% | 79.1% |
| 3727195 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.72 | 62.0 | 5.57e-01 | 95.3% | 77.5% |
| 3384692 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.71 | 61.0 | 5.84e-01 | 95.3% | 91.0% |
| 3317394 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.70 | 62.0 | 4.38e-01 | 97.6% | 37.7% |
| 3972017 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.68 | 54.0 | 5.08e-01 | 87.1% | 77.1% |
| 4937238 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.68 | 54.0 | 5.09e-01 | 87.1% | 70.5% |
| 5002717 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.67 | 54.0 | 5.12e-01 | 87.1% | 74.0% |
| 5040845 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.67 | 53.0 | 5.02e-01 | 87.1% | 73.0% |
| 4931048 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.67 | 53.0 | 5.03e-01 | 87.1% | 73.0% |
| 4964137 | 304.3.1.11 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MNHE | 0.67 | 52.0 | 4.78e-01 | 100.0% | 63.5% |
| 3452455 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 49.0 | 5.29e-01 | 97.6% | 95.7% |
| 4547757 | 304.55.1.6 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › MobA_MobL | 0.66 | 53.0 | 4.07e-01 | 89.4% | 44.4% |
| 3956202 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 58.0 | 3.98e-01 | 97.6% | 97.2% |
| 3329738 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.65 | 50.0 | 5.10e-01 | 83.5% | 85.9% |
| 5077287 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.64 | 56.0 | 4.01e-01 | 100.0% | 75.2% |
| 222395 | 304.55.1.6 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › MobA_MobL | 0.63 | 51.0 | 3.97e-01 | 90.6% | 51.0% |
| 4102489 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.61 | 49.0 | 5.14e-01 | 92.9% | 100.0% |
| 4612678 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.60 | 48.0 | 5.07e-01 | 91.8% | 100.0% |
| 3601299 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 53.0 | 4.68e-01 | 100.0% | 89.6% |
| 4968936 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.60 | 47.0 | 3.63e-01 | 89.4% | 72.1% |
| 4669080 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.59 | 51.0 | 4.92e-01 | 100.0% | 84.0% |
| 4302792 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.59 | 47.0 | 4.95e-01 | 96.5% | 100.0% |
| 4352260 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.59 | 49.0 | 5.05e-01 | 97.6% | 98.8% |
| 4612895 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.59 | 47.0 | 4.93e-01 | 97.6% | 100.0% |
| 3744323 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.59 | 46.0 | 3.23e-01 | 92.9% | 25.7% |
| 4929251 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.59 | 47.0 | 3.71e-01 | 89.4% | 71.1% |
| 4085474 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.59 | 47.0 | 4.91e-01 | 90.6% | 100.0% |
| 3205290 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.59 | 45.0 | 2.60e-01 | 92.9% | 8.8% |
| 4112847 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.58 | 46.0 | 4.87e-01 | 91.8% | 100.0% |
| 3635090 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.58 | 44.0 | 3.08e-01 | 92.9% | 24.2% |
| 4081051 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.58 | 46.0 | 4.77e-01 | 88.2% | 100.0% |
| 1317906 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.57 | 49.0 | 4.92e-01 | 98.8% | 96.4% |
| 3950933 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.57 | 46.0 | 3.30e-01 | 89.4% | 73.6% |
| 4546407 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.57 | 46.0 | 4.70e-01 | 98.8% | 98.8% |
| 3756865 | 220.1.1.170 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin | 0.56 | 41.0 | 3.51e-01 | 77.6% | 85.0% |
| 3364356 | 2488.1.1.12 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA | 0.55 | 40.0 | 3.55e-01 | 76.5% | 61.6% |
| 4664008 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.55 | 40.0 | 3.80e-01 | 77.6% | 89.5% |
| 3410729 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.54 | 42.0 | 3.40e-01 | 83.5% | 100.0% |
| 4340493 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.53 | 43.0 | 3.15e-01 | 89.4% | 41.9% |
| 4255181 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.53 | 45.0 | 4.32e-01 | 95.3% | 96.0% |
| 4106352 | 154.1.1.1 ↗ | alpha bundles › Methyl-coenzyme M reductase alpha and beta chain-C › Methyl-coenzyme M reductase alpha and beta chain-C › Methyl-coenzyme M reductase alpha and beta chain-C › MCR_beta | 0.53 | 42.0 | 3.14e-01 | 91.8% | 35.2% |
| 3274271 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.53 | 42.0 | 3.00e-01 | 89.4% | 78.9% |
| 3244833 | 3914.1.1.2 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer | 0.52 | 44.0 | 2.63e-01 | 95.3% | 57.9% |
| 4667973 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.52 | 41.0 | 4.37e-01 | 88.2% | 100.0% |
| 4010258 | 2008.1.1.58 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF3799 | 0.52 | 44.0 | 3.23e-01 | 98.8% | 81.9% |
| 3432084 | 2004.5.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN,dDENN | 0.52 | 40.0 | 2.90e-01 | 83.5% | 31.7% |
| 5052532 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.51 | 40.0 | 4.00e-01 | 87.1% | 97.8% |
| 3906424 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.51 | 39.0 | 3.38e-01 | 84.7% | 77.9% |
D2
medium
residues 12-95
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 46.0 | 3.86e-01 | 81.0% | 46.2% |
| 1zc6A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 49.0 | 4.05e-01 | 88.1% | 78.2% |
| 3w0fA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 44.0 | 3.79e-01 | 81.0% | 65.4% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.56 | 37.0 | 3.36e-01 | 88.1% | 46.0% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 37.0 | 3.30e-01 | 70.2% | 91.1% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.54 | 41.0 | 3.42e-01 | 81.0% | 64.4% |
| 7dswA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.53 | 45.0 | 2.92e-01 | 96.4% | 70.1% |
| 4f4cA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.52 | 37.0 | 2.20e-01 | 73.8% | 74.9% |
| 3g0oA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 35.0 | 3.16e-01 | 70.2% | 92.6% |
| 2zpaA04 | 1.20.120.890 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA(Met) cytidine acetyltransferase, tail domain | 0.51 | 44.0 | 3.80e-01 | 98.8% | 67.6% |
| 4l0fA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 44.0 | 2.84e-01 | 100.0% | 70.0% |
| 1gakA00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.51 | 39.0 | 3.36e-01 | 97.6% | 50.4% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 38.0 | 3.98e-01 | 85.7% | 89.5% |
| 2gf2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 36.0 | 3.20e-01 | 77.4% | 57.5% |
| 4irlB02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.50 | 35.0 | 3.44e-01 | 75.0% | 66.7% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.50 | 35.0 | 3.35e-01 | 72.6% | 94.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3248091 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.69 | 42.0 | 4.23e-01 | 77.4% | 60.0% |
| 3284182 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.64 | 53.0 | 3.68e-01 | 90.5% | 49.3% |
| 1566530 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.64 | 42.0 | 4.29e-01 | 78.6% | 69.1% |
| 3829115 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.63 | 41.0 | 4.66e-01 | 95.2% | 87.7% |
| 3944665 | 605.1.1.168 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Aldedh | 0.61 | 36.0 | 3.22e-01 | 81.0% | 41.7% |
| 3998929 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 35.0 | 3.09e-01 | 71.4% | 39.2% |
| 4975282 | 545.1.2.0 ↗ | alpha bundles › Gametocyte protein Pfg27-related › Gametocyte protein Pfg27-related › Sporozoite protein UIS3 soluble domain | 0.57 | 38.0 | 3.91e-01 | 94.0% | 72.5% |
| 3394780 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.53 | 43.0 | 3.93e-01 | 90.5% | 94.8% |
| 4966498 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.53 | 39.0 | 3.79e-01 | 77.4% | 85.3% |
| 3870636 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 33.0 | 3.67e-01 | 82.1% | 81.5% |
| 3528706 | 192.29.1.11 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FerA | 0.52 | 39.0 | 3.46e-01 | 81.0% | 84.8% |
| 4944123 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.52 | 40.0 | 3.49e-01 | 83.3% | 86.2% |
| 4026843 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.52 | 37.0 | 4.04e-01 | 83.3% | 91.4% |
| 5012961 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.51 | 39.0 | 3.42e-01 | 82.1% | 85.4% |
| 3897972 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 31.0 | 3.29e-01 | 100.0% | 69.3% |
| 3502563 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.51 | 34.0 | 3.14e-01 | 100.0% | 54.3% |