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OR387861.1__WNI00546.1__vbSpy7_46__00046
Bact-VirOR387861.1__WNI00546.1__vbSpy7_46__00046
Identity
- Accession:
- OR387861 ↗
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-145
Domain cluster:
rep: NC_028697.1__YP_009191553.1__AU092_gp46__00046__D5-141
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05382.20 best | Amidase_5 | 187.0 | 2.20e-55 | 100.0% | 93.0% |
| PF00877.26 | NLPC_P60 | 31.9 | 1.50e-07 | 84.4% | 81.0% |
D2
medium
residues 164-205
D3
medium
residues 210-251
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08230.17 best | CW_7 | 49.2 | 4.90e-13 | 88.1% | 97.5% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.76 | 62.0 | 5.21e-01 | 92.9% | 63.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 48.0 | 3.53e-01 | 71.4% | 29.1% |
| 2zfuA01 | 1.10.10.2150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal RNA-processing protein 8, N-terminal domain | 0.63 | 50.0 | 4.82e-01 | 95.2% | 80.4% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 44.0 | 3.61e-01 | 78.6% | 57.8% |
| 4d6wB02 | 6.10.140.740 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 44.0 | 3.49e-01 | 78.6% | 58.7% |
| 1lujB01 | 1.10.10.490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT | 0.61 | 49.0 | 4.70e-01 | 100.0% | 77.4% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.61 | 44.0 | 3.69e-01 | 78.6% | 54.1% |
| 1uouA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.60 | 50.0 | 4.39e-01 | 100.0% | 73.5% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 43.0 | 2.61e-01 | 88.1% | 11.4% |
| 4hb9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 45.0 | 2.69e-01 | 100.0% | 86.1% |
| 6jw7A01 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 43.0 | 2.91e-01 | 92.9% | 35.7% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.53 | 41.0 | 3.12e-01 | 95.2% | 39.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4359331 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.68 | 47.0 | 4.21e-01 | 78.6% | 51.7% |
| 3515936 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.67 | 56.0 | 5.06e-01 | 100.0% | 70.0% |