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OR397124.1__WMU95098.1__ADOKEBJH_00001__00001
Bact-VirOR397124.1__WMU95098.1__ADOKEBJH_00001__00001
Identity
- Accession:
- OR397124 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-61
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uhvA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.72 | 39.0 | 3.37e-01 | 94.9% | 33.7% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.63 | 33.0 | 3.53e-01 | 71.2% | 52.9% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 34.0 | 2.87e-01 | 72.9% | 28.7% |
| 2v4jB03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 39.0 | 3.81e-01 | 76.3% | 60.0% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 38.0 | 2.56e-01 | 96.6% | 15.7% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 33.0 | 3.85e-01 | 74.6% | 83.8% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.57 | 38.0 | 3.31e-01 | 78.0% | 42.3% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 36.0 | 3.01e-01 | 76.3% | 34.8% |
| 2fdoA00 | 3.30.1970.10 | Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like | 0.54 | 36.0 | 3.13e-01 | 83.1% | 44.1% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 35.0 | 2.66e-01 | 86.4% | 28.3% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 42.0 | 2.83e-01 | 96.6% | 34.3% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.52 | 36.0 | 3.33e-01 | 72.9% | 57.7% |
| 1ex0B02 | 3.90.260.10 | Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like | 0.51 | 39.0 | 2.51e-01 | 84.7% | 23.3% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.68e-01 | 76.3% | 48.8% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 2.84e-01 | 83.1% | 55.9% |
| 4hvmB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 43.0 | 3.11e-01 | 100.0% | 74.5% |
| 2xtmA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 2.51e-01 | 76.3% | 56.5% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 33.0 | 2.97e-01 | 76.3% | 42.7% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.50 | 30.0 | 2.79e-01 | 83.1% | 44.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3900298 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.73 | 53.0 | 3.48e-01 | 78.0% | 22.0% |
| 3269923 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.73 | 53.0 | 3.55e-01 | 78.0% | 23.5% |
| 3740693 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.73 | 52.0 | 2.95e-01 | 76.3% | 9.4% |
| 3402962 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.72 | 52.0 | 3.38e-01 | 78.0% | 23.3% |
| 3868175 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.72 | 52.0 | 3.06e-01 | 78.0% | 11.6% |
| 3750327 | 109.4.1.2865 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RPOL_N | 0.71 | 52.0 | 3.10e-01 | 78.0% | 13.2% |
| 3550551 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.71 | 51.0 | 3.37e-01 | 78.0% | 22.0% |
| 3488752 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.70 | 51.0 | 3.31e-01 | 78.0% | 25.8% |
| 4807857 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.65 | 46.0 | 3.45e-01 | 76.3% | 36.4% |
| 3233262 | 706.1.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE | 0.64 | 36.0 | 4.18e-01 | 84.7% | 88.6% |
| None | — | 0.63 | 39.0 | 3.19e-01 | 72.9% | 31.3% | |
| 3788129 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.63 | 39.0 | 3.62e-01 | 79.7% | 49.3% |
| 3888254 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 33.0 | 3.70e-01 | 81.4% | 71.1% |
| 3482807 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.59 | 36.0 | 2.97e-01 | 84.7% | 33.3% |
| 3283375 | 2005.1.1.95 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF28097 | 0.59 | 43.0 | 2.84e-01 | 83.1% | 36.6% |
| 4993592 | 205.1.1.17 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_11 | 0.56 | 47.0 | 3.33e-01 | 100.0% | 87.3% |
| 4029951 | 220.1.1.310 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29397, PF29398 | 0.55 | 34.0 | 2.55e-01 | 88.1% | 24.8% |
| 3623871 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.55 | 42.0 | 2.66e-01 | 83.1% | 23.0% |
| 3370663 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.54 | 32.0 | 3.24e-01 | 72.9% | 54.2% |
| 3494759 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 35.0 | 2.90e-01 | 76.3% | 33.9% |
| 3430114 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 34.0 | 3.37e-01 | 78.0% | 61.5% |
| 3962354 | 323.1.1.15 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › WS_DGAT_C | 0.52 | 38.0 | 2.75e-01 | 81.4% | 30.7% |
| 4888882 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.52 | 36.0 | 2.61e-01 | 74.6% | 22.5% |
| 4991257 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.51 | 38.0 | 2.47e-01 | 83.1% | 72.5% |
| 2640297 | 808.1.1.1 ↗ | a+b duplicates or obligate multimers › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › CoV_nucleocap | 0.51 | 29.0 | 2.41e-01 | 72.9% | 25.0% |
| 3217960 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.51 | 40.0 | 3.41e-01 | 89.8% | 83.8% |
| 4004088 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 30.0 | 3.47e-01 | 72.9% | 87.5% |
| 3908446 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.50 | 38.0 | 2.60e-01 | 86.4% | 24.7% |