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OR397124.1__WMU95219.1__ADOKEBJH_00123__00122
Bact-VirOR397124.1__WMU95219.1__ADOKEBJH_00123__00122
Identity
- Accession:
- OR397124 ↗
- Kingdom:
- phage
Quality
94.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-98
Domain cluster:
rep: KY971610.1__ASD52007.1__PspYZU05_55__00055__D90-171
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24703.3 best | DUF7666 | 113.5 | 7.60e-33 | 98.9% | 95.8% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 29.0 | 3.72e-01 | 97.8% | 87.5% |
| 3k50A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.53 | 32.0 | 3.09e-01 | 97.8% | 52.0% |
| 1j5uA01 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.53 | 36.0 | 3.38e-01 | 71.1% | 99.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995698 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.84 | 76.0 | 7.36e-01 | 96.7% | 100.0% |
| 3378730 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.69 | 63.0 | 4.71e-01 | 98.9% | 57.0% |
| 4296568 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.67 | 60.0 | 5.97e-01 | 98.9% | 94.7% |
| 4032920 | 237.1.1.11 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RES | 0.66 | 60.0 | 4.56e-01 | 98.9% | 88.4% |
| 3269559 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.64 | 56.0 | 4.85e-01 | 98.9% | 63.0% |
| 5002376 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 31.0 | 3.00e-01 | 96.7% | 43.8% |
| 3731790 | 12.3.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 | 0.52 | 42.0 | 3.07e-01 | 92.2% | 76.2% |
| 4328171 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.51 | 44.0 | 3.25e-01 | 97.8% | 44.5% |
D2
high
residues 220-310
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zw9B01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.24e-01 | 93.4% | 86.9% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.50 | 31.0 | 3.23e-01 | 73.6% | 63.6% |
D3
medium
residues 117-217
Domain cluster:
representative
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01469.25 best | Pentapeptide_2 | 31.0 | 2.50e-07 | 42.6% | 95.0% |
| PF01469.25 | Pentapeptide_2 | 35.5 | 9.90e-09 | 38.6% | 87.5% |
| PF01469.25 | Pentapeptide_2 | 29.5 | 7.50e-07 | 30.7% | 72.5% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ntnB01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.89 | 78.0 | 6.49e-01 | 92.1% | 95.2% |
| 3ultA00 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.88 | 70.0 | 6.70e-01 | 82.2% | 100.0% |
| 1hv9B02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.81 | 74.0 | 5.91e-01 | 99.0% | 92.6% |
| 3fs8A01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.80 | 72.0 | 5.50e-01 | 97.0% | 94.6% |
| 5jxxA01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.79 | 71.0 | 5.67e-01 | 96.0% | 96.9% |
| 4e79A02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.78 | 70.0 | 5.47e-01 | 98.0% | 93.3% |
| 2ggoA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.77 | 64.0 | 5.15e-01 | 90.1% | 91.1% |
| 3sucA02 | 2.160.10.20 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Insect antifreeze protein | 0.74 | 67.0 | 6.05e-01 | 97.0% | 97.8% |
| 3mqgC01 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.74 | 58.0 | 5.00e-01 | 82.2% | 97.4% |
| 3jqyC00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.74 | 61.0 | 4.81e-01 | 91.1% | 87.0% |
| 1kgqA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.70 | 58.0 | 4.84e-01 | 88.1% | 97.1% |
| 3r1wA00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.70 | 57.0 | 4.69e-01 | 88.1% | 83.3% |
| 3d98A02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.69 | 59.0 | 5.13e-01 | 92.1% | 94.1% |
| 1thjA00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.69 | 58.0 | 4.54e-01 | 91.1% | 83.1% |
| 7whsA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.69 | 53.0 | 4.76e-01 | 82.2% | 89.4% |
| 6sc4A00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.68 | 55.0 | 4.52e-01 | 86.1% | 85.3% |
| 7d73E02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.68 | 53.0 | 4.76e-01 | 83.2% | 86.1% |
| 3tv0A00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.67 | 55.0 | 4.85e-01 | 86.1% | 95.8% |
| 4n27A00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.67 | 56.0 | 4.66e-01 | 90.1% | 84.0% |
| 7d73C02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.67 | 52.0 | 4.38e-01 | 82.2% | 88.7% |
| 2wlgB00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.66 | 57.0 | 4.47e-01 | 94.1% | 87.6% |
| 3c8vC03 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.65 | 55.0 | 4.73e-01 | 92.1% | 84.4% |
| 3c8vA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.65 | 57.0 | 4.35e-01 | 98.0% | 86.8% |
| 5afuV00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.63 | 49.0 | 4.19e-01 | 84.2% | 83.6% |
| 1krrA00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.61 | 49.0 | 3.96e-01 | 87.1% | 76.0% |
| 3hjjC00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.61 | 50.0 | 4.11e-01 | 89.1% | 81.6% |
| 5l6vE02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.56 | 40.0 | 3.69e-01 | 74.3% | 85.5% |
| 2yo0A01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.54 | 45.0 | 3.87e-01 | 90.1% | 78.6% |
| 1fxjA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.50 | 37.0 | 3.90e-01 | 79.2% | 97.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3958224 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 1.00 | 82.0 | 9.04e-01 | 84.2% | 100.0% |
| 3953340 | 208.7.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Pentapeptide_2 | 0.99 | 82.0 | 8.96e-01 | 84.2% | 100.0% |
| 3954538 | 208.7.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Pentapeptide_2 | 0.98 | 79.0 | 8.64e-01 | 82.2% | 100.0% |
| 3958968 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.98 | 96.0 | 6.84e-01 | 100.0% | 49.8% |
| 3952747 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.98 | 94.0 | 5.93e-01 | 98.0% | 24.4% |
| 3954290 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.98 | 88.0 | 8.92e-01 | 92.1% | 100.0% |
| 3958451 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.98 | 95.0 | 6.76e-01 | 99.0% | 44.5% |
| 3955945 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.98 | 94.0 | 7.26e-01 | 98.0% | 58.4% |
| 3960821 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.98 | 93.0 | 8.16e-01 | 97.0% | 85.2% |
| 3960182 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.97 | 94.0 | 8.17e-01 | 99.0% | 91.4% |
| 3960879 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.97 | 95.0 | 6.15e-01 | 100.0% | 29.3% |
| 4417044 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.97 | 93.0 | 6.72e-01 | 98.0% | 45.5% |
| 3956167 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.97 | 94.0 | 5.34e-01 | 100.0% | 42.1% |
| 3959782 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.96 | 91.0 | 8.49e-01 | 98.0% | 82.5% |
| 3955823 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.95 | 90.0 | 7.68e-01 | 99.0% | 72.7% |
| 3953246 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.95 | 91.0 | 8.33e-01 | 99.0% | 92.7% |
| 3954054 | 208.2.1.9 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Pentapeptide_2 | 0.94 | 88.0 | 7.79e-01 | 97.0% | 80.7% |
| 3957460 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.89 | 84.0 | 8.27e-01 | 97.0% | 98.1% |
| 1146565 | 208.7.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › LbR_Ice_bind | 0.88 | 70.0 | 6.70e-01 | 82.2% | 100.0% |
| 4167751 | 208.1.1.31 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep_2, GMPPB_C | 0.79 | 74.0 | 5.87e-01 | 100.0% | 93.2% |
| 4243605 | 208.1.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Hexapep_2 | 0.79 | 73.0 | 5.53e-01 | 100.0% | 79.0% |
| 4179710 | 208.1.1.18 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep+Hexapep_GlmU | 0.78 | 69.0 | 5.43e-01 | 98.0% | 84.3% |
| 4110478 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.77 | 70.0 | 5.49e-01 | 100.0% | 85.2% |
| 5028062 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.76 | 57.0 | 4.61e-01 | 80.2% | 83.0% |
| 364253 | 208.2.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Peptidase_G2 | 0.74 | 67.0 | 5.93e-01 | 97.0% | 93.6% |
| 5023257 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.74 | 60.0 | 4.88e-01 | 87.1% | 95.1% |
| 4956512 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.71 | 52.0 | 5.10e-01 | 77.2% | 95.5% |
| 2731447 | 208.1.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › LbH_EIF2B | 0.64 | 50.0 | 4.53e-01 | 82.2% | 91.9% |
| 7255 | 208.3.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Insect antifreeze protein › Insect antifreeze protein › CfAFP | 0.64 | 54.0 | 5.11e-01 | 91.1% | 90.0% |
| 979110 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.62 | 53.0 | 4.36e-01 | 91.1% | 93.2% |
| 5052851 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.54 | 39.0 | 4.09e-01 | 75.2% | 97.8% |
| 4930356 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.53 | 37.0 | 4.23e-01 | 85.1% | 98.6% |
| 4463206 | 208.1.1.45 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Bactofilin | 0.51 | 45.0 | 3.42e-01 | 96.0% | 85.7% |